Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN12P56749 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN12P56749 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN12P56749 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN12P56749 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN12P56749 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN12P56749 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN12P56749 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN12P56749 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CLDN12P56749 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN12P56749 AP000997.3-201ENST00000623333 2250 ntBASIC16.58■□□□□ 0.25
CLDN12P56749 AC067852.2-201ENST00000590513 2313 ntBASIC16.58■□□□□ 0.25
CLDN12P56749 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN12P56749 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDN12P56749 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN12P56749 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN12P56749 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN12P56749 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN12P56749 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN12P56749 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN12P56749 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN12P56749 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN12P56749 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN12P56749 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN12P56749 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 ANO7L1-203ENST00000602586 1720 ntBASIC16.57■□□□□ 0.24
CLDN12P56749 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms