Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATXN1P54253 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATXN1P54253 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATXN1P54253 AC026396.1-201ENST00000419388 421 ntBASIC20.03■□□□□ 0.8
ATXN1P54253 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 AC008040.2-201ENST00000461049 708 ntBASIC20.03■□□□□ 0.8
ATXN1P54253 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.03■□□□□ 0.8
ATXN1P54253 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.03■□□□□ 0.8
ATXN1P54253 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
ATXN1P54253 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 AP000525.1-201ENST00000608286 694 ntBASIC20.02■□□□□ 0.8
ATXN1P54253 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN1P54253 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN1P54253 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ATXN1P54253 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATXN1P54253 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.02■□□□□ 0.79
ATXN1P54253 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATXN1P54253 AL049812.1-201ENST00000432563 2267 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN1P54253 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN1P54253 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 UNC93B2-201ENST00000285383 730 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 MIR1238-201ENST00000408483 83 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.01■□□□□ 0.79
ATXN1P54253 AC011506.1-201ENST00000474329 610 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.01■□□□□ 0.79
ATXN1P54253 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 AC091076.1-201ENST00000610741 619 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 AC131212.4-201ENST00000623606 975 ntBASIC20.01■□□□□ 0.79
ATXN1P54253 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN1P54253 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN1P54253 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 AC087289.5-201ENST00000586076 3175 ntBASIC20■□□□□ 0.79
ATXN1P54253 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20■□□□□ 0.79
ATXN1P54253 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ATXN1P54253 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 MESTP1-201ENST00000404287 994 ntBASIC20■□□□□ 0.79
ATXN1P54253 SLC25A3P1-201ENST00000443844 931 ntBASIC20■□□□□ 0.79
ATXN1P54253 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20■□□□□ 0.79
ATXN1P54253 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20■□□□□ 0.79
ATXN1P54253 NAPSB-206ENST00000562112 1266 ntBASIC20■□□□□ 0.79
ATXN1P54253 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20■□□□□ 0.79
ATXN1P54253 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ATXN1P54253 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20■□□□□ 0.79
ATXN1P54253 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ATXN1P54253 RCC2P6-201ENST00000526625 1557 ntBASIC20■□□□□ 0.79
ATXN1P54253 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN1P54253 AC141586.3-201ENST00000562166 1838 ntBASIC19.99■□□□□ 0.79
ATXN1P54253 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms