Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.51■□□□□ 0.39
SSR4P51571 AP003041.3-201ENST00000527151 707 ntBASIC17.51■□□□□ 0.39
SSR4P51571 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.51■□□□□ 0.39
SSR4P51571 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
SSR4P51571 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR4P51571 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.51■□□□□ 0.39
SSR4P51571 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SSR4P51571 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 AC073130.3-201ENST00000624389 2278 ntBASIC17.51■□□□□ 0.39
SSR4P51571 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSR4P51571 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.51■□□□□ 0.39
SSR4P51571 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR4P51571 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.5■□□□□ 0.39
SSR4P51571 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR4P51571 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.5■□□□□ 0.39
SSR4P51571 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR4P51571 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR4P51571 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR4P51571 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SSR4P51571 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR4P51571 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
SSR4P51571 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 AFG3L1P-217ENST00000557444 2447 ntBASIC17.5■□□□□ 0.39
SSR4P51571 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR4P51571 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR4P51571 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SSR4P51571 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
SSR4P51571 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR4P51571 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.49■□□□□ 0.39
SSR4P51571 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.49■□□□□ 0.39
SSR4P51571 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR4P51571 AC010331.1-201ENST00000611423 582 ntBASIC17.49■□□□□ 0.39
SSR4P51571 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSR4P51571 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
SSR4P51571 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SSR4P51571 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSR4P51571 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR4P51571 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR4P51571 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR4P51571 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSR4P51571 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR4P51571 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SSR4P51571 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SSR4P51571 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSR4P51571 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSR4P51571 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.48■□□□□ 0.39
SSR4P51571 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR4P51571 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SSR4P51571 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms