Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK7P50613 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK7P50613 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CDK7P50613 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CDK7P50613 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK7P50613 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CDK7P50613 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CDK7P50613 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDK7P50613 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 BX276092.5-203ENST00000456199 560 ntBASIC21.08■□□□□ 0.97
CDK7P50613 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.08■□□□□ 0.97
CDK7P50613 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK7P50613 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK7P50613 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK7P50613 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDK7P50613 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK7P50613 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDK7P50613 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK7P50613 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CDK7P50613 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
CDK7P50613 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDK7P50613 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.08■□□□□ 0.96
CDK7P50613 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK7P50613 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.96
CDK7P50613 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
CDK7P50613 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
CDK7P50613 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 AC004870.1-201ENST00000315132 882 ntBASIC21.07■□□□□ 0.96
CDK7P50613 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
CDK7P50613 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.07■□□□□ 0.96
CDK7P50613 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 AC111152.3-201ENST00000569699 673 ntBASIC21.07■□□□□ 0.96
CDK7P50613 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.07■□□□□ 0.96
CDK7P50613 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.07■□□□□ 0.96
CDK7P50613 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CDK7P50613 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK7P50613 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.06■□□□□ 0.96
CDK7P50613 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDK7P50613 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CDK7P50613 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 AP000347.1-202ENST00000435868 847 ntBASIC21.06■□□□□ 0.96
CDK7P50613 FAAHP1-202ENST00000446499 1238 ntBASIC21.06■□□□□ 0.96
CDK7P50613 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.06■□□□□ 0.96
CDK7P50613 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.06■□□□□ 0.96
CDK7P50613 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.06■□□□□ 0.96
CDK7P50613 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDK7P50613 LINC01521-201ENST00000504184 1943 ntBASIC21.06■□□□□ 0.96
CDK7P50613 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.05■□□□□ 0.96
CDK7P50613 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDK7P50613 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CDK7P50613 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK7P50613 NUS1P1-201ENST00000446295 882 ntBASIC21.05■□□□□ 0.96
CDK7P50613 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.05■□□□□ 0.96
CDK7P50613 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK7P50613 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 AC020907.5-201ENST00000624372 1936 ntBASIC21.05■□□□□ 0.96
CDK7P50613 AL691432.2-201ENST00000607222 2038 ntBASIC21.05■□□□□ 0.96
CDK7P50613 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK7P50613 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CDK7P50613 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDK7P50613 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK7P50613 KRT8P10-201ENST00000450021 1447 ntBASIC21.04■□□□□ 0.96
CDK7P50613 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK7P50613 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK7P50613 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK7P50613 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.04■□□□□ 0.96
CDK7P50613 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK7P50613 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK7P50613 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms