Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.43■□□□□ 0.38
ATRXP46100 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
ATRXP46100 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATRXP46100 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 KRT8P11-201ENST00000409686 1436 ntBASIC17.43■□□□□ 0.38
ATRXP46100 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.43■□□□□ 0.38
ATRXP46100 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.43■□□□□ 0.38
ATRXP46100 AL008721.1-201ENST00000609964 604 ntBASIC17.43■□□□□ 0.38
ATRXP46100 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
ATRXP46100 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATRXP46100 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.42■□□□□ 0.38
ATRXP46100 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.42■□□□□ 0.38
ATRXP46100 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.42■□□□□ 0.38
ATRXP46100 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.42■□□□□ 0.38
ATRXP46100 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.42■□□□□ 0.38
ATRXP46100 MIR6752-201ENST00000618442 71 ntBASIC17.42■□□□□ 0.38
ATRXP46100 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.42■□□□□ 0.38
ATRXP46100 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATRXP46100 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.41■□□□□ 0.38
ATRXP46100 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 AL645939.2-201ENST00000427340 991 ntBASIC17.41■□□□□ 0.38
ATRXP46100 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 KRT8P26-201ENST00000534154 1276 ntBASIC17.41■□□□□ 0.38
ATRXP46100 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.41■□□□□ 0.38
ATRXP46100 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.41■□□□□ 0.38
ATRXP46100 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 MED15P5-201ENST00000423150 992 ntBASIC17.41■□□□□ 0.38
ATRXP46100 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.41■□□□□ 0.38
ATRXP46100 SEC1P-202ENST00000473944 940 ntBASIC17.41■□□□□ 0.38
ATRXP46100 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.41■□□□□ 0.38
ATRXP46100 AL606495.2-201ENST00000605867 535 ntBASIC17.41■□□□□ 0.38
ATRXP46100 AC106028.4-201ENST00000614509 607 ntBASIC17.41■□□□□ 0.38
ATRXP46100 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATRXP46100 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.41■□□□□ 0.38
ATRXP46100 GUSBP5-202ENST00000510805 1989 ntBASIC17.41■□□□□ 0.38
ATRXP46100 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATRXP46100 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ATRXP46100 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATRXP46100 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATRXP46100 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.4■□□□□ 0.38
ATRXP46100 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.4■□□□□ 0.38
ATRXP46100 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATRXP46100 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATRXP46100 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.4■□□□□ 0.38
ATRXP46100 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms