Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP6V1AP38606 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 CHCHD2P8-201ENST00000429873 447 ntBASIC24.32■■□□□ 1.48
ATP6V1AP38606 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.32■■□□□ 1.48
ATP6V1AP38606 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP6V1AP38606 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 IFNL4P1-201ENST00000607083 540 ntBASIC24.32■■□□□ 1.48
ATP6V1AP38606 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 AL157888.1-201ENST00000631930 593 ntBASIC24.32■■□□□ 1.48
ATP6V1AP38606 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP6V1AP38606 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6V1AP38606 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6V1AP38606 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6V1AP38606 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 HLA-F-220ENST00000434407 884 ntBASIC24.31■■□□□ 1.48
ATP6V1AP38606 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 MIR3180-5-201ENST00000583743 153 ntBASIC24.31■■□□□ 1.48
ATP6V1AP38606 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 AC093525.10-201ENST00000625130 1569 ntBASIC24.31■■□□□ 1.48
ATP6V1AP38606 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6V1AP38606 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ATP6V1AP38606 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.3■■□□□ 1.48
ATP6V1AP38606 MCCD1P1-208ENST00000445732 328 ntBASIC24.3■■□□□ 1.48
ATP6V1AP38606 EMBP1-201ENST00000458200 901 ntBASIC24.3■■□□□ 1.48
ATP6V1AP38606 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ATP6V1AP38606 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ATP6V1AP38606 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP6V1AP38606 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 KRT18P1-202ENST00000452408 1331 ntBASIC24.3■■□□□ 1.48
ATP6V1AP38606 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1AP38606 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 AL732292.2-201ENST00000609649 430 ntBASIC24.29■■□□□ 1.48
ATP6V1AP38606 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.29■■□□□ 1.48
ATP6V1AP38606 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1AP38606 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 TSPY22P-201ENST00000427496 604 ntBASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 AC009078.2-202ENST00000463353 338 ntBASIC24.28■■□□□ 1.48
ATP6V1AP38606 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 AL136038.4-201ENST00000603606 1261 ntBASIC24.28■■□□□ 1.48
ATP6V1AP38606 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.28■■□□□ 1.48
ATP6V1AP38606 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6V1AP38606 AL391807.1-203ENST00000604392 2365 ntBASIC24.28■■□□□ 1.48
ATP6V1AP38606 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1AP38606 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6V1AP38606 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms