Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCN1P35523 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLCN1P35523 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCN1P35523 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 DPP3P2-201ENST00000416030 1696 ntBASIC21.67■■□□□ 1.06
CLCN1P35523 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCN1P35523 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CLCN1P35523 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.67■■□□□ 1.06
CLCN1P35523 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.67■■□□□ 1.06
CLCN1P35523 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.67■■□□□ 1.06
CLCN1P35523 AC100791.3-201ENST00000617619 330 ntBASIC21.67■■□□□ 1.06
CLCN1P35523 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CLCN1P35523 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCN1P35523 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLCN1P35523 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.66■■□□□ 1.06
CLCN1P35523 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLCN1P35523 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLCN1P35523 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLCN1P35523 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.66■■□□□ 1.06
CLCN1P35523 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.66■■□□□ 1.06
CLCN1P35523 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.66■■□□□ 1.06
CLCN1P35523 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 AC018695.7-201ENST00000624587 2492 ntBASIC21.66■■□□□ 1.06
CLCN1P35523 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCN1P35523 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.65■■□□□ 1.06
CLCN1P35523 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CLCN1P35523 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CLCN1P35523 MCRIP2P1-201ENST00000394346 511 ntBASIC21.65■■□□□ 1.06
CLCN1P35523 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.65■■□□□ 1.06
CLCN1P35523 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 AC080038.1-201ENST00000611274 1154 ntBASIC21.65■■□□□ 1.06
CLCN1P35523 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CLCN1P35523 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.65■■□□□ 1.06
CLCN1P35523 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCN1P35523 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CLCN1P35523 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN1P35523 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN1P35523 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN1P35523 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
CLCN1P35523 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN1P35523 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCN1P35523 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms