Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.27■□□□□ 0.67
HLA-DPA1P20036 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 FAM197Y1-201ENST00000421178 764 ntBASIC19.26■□□□□ 0.67
HLA-DPA1P20036 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.26■□□□□ 0.67
HLA-DPA1P20036 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DPA1P20036 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.25■□□□□ 0.67
HLA-DPA1P20036 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AP006294.2-201ENST00000641667 209 ntBASIC19.25■□□□□ 0.67
HLA-DPA1P20036 AL049637.2-201ENST00000641778 930 ntBASIC19.25■□□□□ 0.67
HLA-DPA1P20036 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DPA1P20036 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 AC091390.4-202ENST00000476426 537 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 PRSS44-201ENST00000515154 1146 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 MIR6786-201ENST00000616843 113 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 AC011298.2-201ENST00000617989 482 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 AC113410.3-201ENST00000623366 203 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DPA1P20036 AP000974.1-201ENST00000623909 2387 ntBASIC19.24■□□□□ 0.67
HLA-DPA1P20036 FSCN1P1-201ENST00000568912 1481 ntBASIC19.23■□□□□ 0.67
HLA-DPA1P20036 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPA1P20036 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DPA1P20036 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
HLA-DPA1P20036 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms