Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
XRCC1P18887 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
XRCC1P18887 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.01■□□□□ 0.63
XRCC1P18887 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.01■□□□□ 0.63
XRCC1P18887 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.01■□□□□ 0.63
XRCC1P18887 TSPY15P-201ENST00000457163 923 ntBASIC19.01■□□□□ 0.63
XRCC1P18887 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
XRCC1P18887 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
XRCC1P18887 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.01■□□□□ 0.63
XRCC1P18887 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.01■□□□□ 0.63
XRCC1P18887 AL031985.4-201ENST00000642138 673 ntBASIC19.01■□□□□ 0.63
XRCC1P18887 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.01■□□□□ 0.63
XRCC1P18887 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.01■□□□□ 0.63
XRCC1P18887 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
XRCC1P18887 AL032819.2-201ENST00000624543 2162 ntBASIC19■□□□□ 0.63
XRCC1P18887 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
XRCC1P18887 KRT8P8-201ENST00000434750 1448 ntBASIC19■□□□□ 0.63
XRCC1P18887 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 NME1-207ENST00000480143 964 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19■□□□□ 0.63
XRCC1P18887 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
XRCC1P18887 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19■□□□□ 0.63
XRCC1P18887 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
XRCC1P18887 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
XRCC1P18887 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.99■□□□□ 0.63
XRCC1P18887 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
XRCC1P18887 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.99■□□□□ 0.63
XRCC1P18887 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.99■□□□□ 0.63
XRCC1P18887 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.99■□□□□ 0.63
XRCC1P18887 REXO1L10P-201ENST00000615707 1290 ntBASIC18.99■□□□□ 0.63
XRCC1P18887 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
XRCC1P18887 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
XRCC1P18887 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC1P18887 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
XRCC1P18887 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
XRCC1P18887 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.98■□□□□ 0.63
XRCC1P18887 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
XRCC1P18887 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.98■□□□□ 0.63
XRCC1P18887 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 AL138781.2-201ENST00000617896 1843 ntBASIC18.98■□□□□ 0.63
XRCC1P18887 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.98■□□□□ 0.63
XRCC1P18887 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
XRCC1P18887 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC1P18887 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms