Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DMDP11532 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DMDP11532 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 RPL13AP23-201ENST00000480739 586 ntBASIC18.85■□□□□ 0.61
DMDP11532 TERC-201ENST00000602385 541 ntBASIC18.85■□□□□ 0.61
DMDP11532 AC140113.2-201ENST00000604370 208 ntBASIC18.85■□□□□ 0.61
DMDP11532 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.85■□□□□ 0.61
DMDP11532 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
DMDP11532 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.85■□□□□ 0.61
DMDP11532 AL160286.2-201ENST00000567150 934 ntBASIC18.85■□□□□ 0.61
DMDP11532 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.85■□□□□ 0.61
DMDP11532 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.85■□□□□ 0.61
DMDP11532 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DMDP11532 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.84■□□□□ 0.61
DMDP11532 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
DMDP11532 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
DMDP11532 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DMDP11532 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.84■□□□□ 0.61
DMDP11532 AP001005.1-201ENST00000571755 1248 ntBASIC18.84■□□□□ 0.61
DMDP11532 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DMDP11532 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
DMDP11532 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.84■□□□□ 0.61
DMDP11532 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 AC098831.1-202ENST00000438821 336 ntBASIC18.84■□□□□ 0.61
DMDP11532 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.84■□□□□ 0.61
DMDP11532 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 AC121338.2-201ENST00000622535 1744 ntBASIC18.84■□□□□ 0.61
DMDP11532 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DMDP11532 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.84■□□□□ 0.61
DMDP11532 AC010327.4-202ENST00000591484 748 ntBASIC18.84■□□□□ 0.61
DMDP11532 AL157888.1-201ENST00000631930 593 ntBASIC18.84■□□□□ 0.61
DMDP11532 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.83■□□□□ 0.61
DMDP11532 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.83■□□□□ 0.61
DMDP11532 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.83■□□□□ 0.61
DMDP11532 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.83■□□□□ 0.61
DMDP11532 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.83■□□□□ 0.61
DMDP11532 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DMDP11532 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
DMDP11532 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.83■□□□□ 0.6
DMDP11532 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DMDP11532 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DMDP11532 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
DMDP11532 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DMDP11532 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
DMDP11532 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
DMDP11532 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DMDP11532 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DMDP11532 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DMDP11532 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.82■□□□□ 0.6
DMDP11532 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.82■□□□□ 0.6
DMDP11532 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DMDP11532 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DMDP11532 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms