Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.26■□□□□ 0.67
RETP07949 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RETP07949 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.25■□□□□ 0.67
RETP07949 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
RETP07949 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
RETP07949 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 PRELID1P1-202ENST00000567272 903 ntBASIC19.25■□□□□ 0.67
RETP07949 AC111152.3-201ENST00000569699 673 ntBASIC19.25■□□□□ 0.67
RETP07949 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.25■□□□□ 0.67
RETP07949 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
RETP07949 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.25■□□□□ 0.67
RETP07949 CR769767.2-201ENST00000622735 460 ntBASIC19.25■□□□□ 0.67
RETP07949 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
RETP07949 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RETP07949 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RETP07949 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.24■□□□□ 0.67
RETP07949 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RETP07949 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.24■□□□□ 0.67
RETP07949 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 AP000347.1-202ENST00000435868 847 ntBASIC19.24■□□□□ 0.67
RETP07949 KRT17P6-201ENST00000453795 1220 ntBASIC19.24■□□□□ 0.67
RETP07949 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.24■□□□□ 0.67
RETP07949 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RETP07949 KRT16P6-202ENST00000425692 1426 ntBASIC19.24■□□□□ 0.67
RETP07949 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.24■□□□□ 0.67
RETP07949 AC092720.2-201ENST00000602388 1665 ntBASIC19.24■□□□□ 0.67
RETP07949 TCF3P1-201ENST00000423021 1937 ntBASIC19.23■□□□□ 0.67
RETP07949 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.23■□□□□ 0.67
RETP07949 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RETP07949 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.23■□□□□ 0.67
RETP07949 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.23■□□□□ 0.67
RETP07949 FAAHP1-202ENST00000446499 1238 ntBASIC19.23■□□□□ 0.67
RETP07949 Z85996.1-201ENST00000494644 937 ntBASIC19.23■□□□□ 0.67
RETP07949 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RETP07949 AC006538.3-201ENST00000612495 578 ntBASIC19.23■□□□□ 0.67
RETP07949 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.23■□□□□ 0.67
RETP07949 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 LINC01311-201ENST00000565162 1445 ntBASIC19.23■□□□□ 0.67
RETP07949 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.23■□□□□ 0.67
RETP07949 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RETP07949 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
RETP07949 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.22■□□□□ 0.67
RETP07949 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RETP07949 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.22■□□□□ 0.67
RETP07949 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RETP07949 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RETP07949 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 STARP1-201ENST00000397973 869 ntBASIC19.22■□□□□ 0.67
RETP07949 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RETP07949 AL845331.1-201ENST00000424978 1190 ntBASIC19.22■□□□□ 0.67
RETP07949 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.22■□□□□ 0.67
RETP07949 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.22■□□□□ 0.67
RETP07949 CKBP1-201ENST00000565489 1086 ntBASIC19.22■□□□□ 0.67
RETP07949 NPAP1P7-201ENST00000613027 823 ntBASIC19.22■□□□□ 0.67
RETP07949 HYMAI.1-201ENST00000620949 238 ntBASIC19.22■□□□□ 0.67
RETP07949 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
RETP07949 KRT8P10-201ENST00000450021 1447 ntBASIC19.22■□□□□ 0.67
RETP07949 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RETP07949 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
RETP07949 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RETP07949 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RETP07949 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RETP07949 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RETP07949 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.21■□□□□ 0.67
RETP07949 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RETP07949 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms