Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LCATP04180 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.69■□□□□ 0.26
LCATP04180 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LCATP04180 AC133681.1-201ENST00000465482 601 ntBASIC16.69■□□□□ 0.26
LCATP04180 AL160286.2-201ENST00000567150 934 ntBASIC16.69■□□□□ 0.26
LCATP04180 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.69■□□□□ 0.26
LCATP04180 AL161938.1-201ENST00000569833 2180 ntBASIC16.69■□□□□ 0.26
LCATP04180 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.69■□□□□ 0.26
LCATP04180 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
LCATP04180 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LCATP04180 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.68■□□□□ 0.26
LCATP04180 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 TSPY20P-201ENST00000450910 630 ntBASIC16.68■□□□□ 0.26
LCATP04180 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.68■□□□□ 0.26
LCATP04180 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LCATP04180 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.68■□□□□ 0.26
LCATP04180 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LCATP04180 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
LCATP04180 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LCATP04180 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.67■□□□□ 0.26
LCATP04180 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
LCATP04180 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.67■□□□□ 0.26
LCATP04180 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LCATP04180 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 KRT18P29-201ENST00000397031 1267 ntBASIC16.67■□□□□ 0.26
LCATP04180 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.67■□□□□ 0.26
LCATP04180 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.67■□□□□ 0.26
LCATP04180 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.67■□□□□ 0.26
LCATP04180 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.67■□□□□ 0.26
LCATP04180 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LCATP04180 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LCATP04180 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
LCATP04180 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LCATP04180 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.66■□□□□ 0.26
LCATP04180 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
LCATP04180 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LCATP04180 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms