Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLPXO76031 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLPXO76031 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.3■□□□□ 0.36
CLPXO76031 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 TEX21P-204ENST00000641479 1693 ntBASIC17.3■□□□□ 0.36
CLPXO76031 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.3■□□□□ 0.36
CLPXO76031 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.3■□□□□ 0.36
CLPXO76031 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.3■□□□□ 0.36
CLPXO76031 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.3■□□□□ 0.36
CLPXO76031 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.3■□□□□ 0.36
CLPXO76031 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.3■□□□□ 0.36
CLPXO76031 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLPXO76031 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.3■□□□□ 0.36
CLPXO76031 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLPXO76031 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPXO76031 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CLPXO76031 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPXO76031 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPXO76031 AP001271.2-201ENST00000624018 1556 ntBASIC17.29■□□□□ 0.36
CLPXO76031 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPXO76031 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.29■□□□□ 0.36
CLPXO76031 AC138907.5-202ENST00000569484 235 ntBASIC17.29■□□□□ 0.36
CLPXO76031 AC104187.1-201ENST00000607510 612 ntBASIC17.29■□□□□ 0.36
CLPXO76031 AC008175.2-201ENST00000612840 297 ntBASIC17.29■□□□□ 0.36
CLPXO76031 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLPXO76031 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPXO76031 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLPXO76031 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLPXO76031 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPXO76031 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPXO76031 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 AC004854.2-201ENST00000608450 1441 ntBASIC17.29■□□□□ 0.36
CLPXO76031 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPXO76031 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLPXO76031 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.28■□□□□ 0.36
CLPXO76031 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLPXO76031 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLPXO76031 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.28■□□□□ 0.36
CLPXO76031 AC010141.2-201ENST00000452426 721 ntBASIC17.28■□□□□ 0.36
CLPXO76031 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.28■□□□□ 0.36
CLPXO76031 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPXO76031 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.28■□□□□ 0.36
CLPXO76031 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPXO76031 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLPXO76031 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPXO76031 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPXO76031 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLPXO76031 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms