Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LGR5O75473 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.21■□□□□ 0.99
LGR5O75473 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
LGR5O75473 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.2■□□□□ 0.98
LGR5O75473 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.2■□□□□ 0.98
LGR5O75473 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.2■□□□□ 0.98
LGR5O75473 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.2■□□□□ 0.98
LGR5O75473 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
LGR5O75473 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LGR5O75473 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
LGR5O75473 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LGR5O75473 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.19■□□□□ 0.98
LGR5O75473 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.19■□□□□ 0.98
LGR5O75473 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.19■□□□□ 0.98
LGR5O75473 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.19■□□□□ 0.98
LGR5O75473 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.19■□□□□ 0.98
LGR5O75473 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.19■□□□□ 0.98
LGR5O75473 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 Z82202.1-201ENST00000623446 1880 ntBASIC21.19■□□□□ 0.98
LGR5O75473 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.19■□□□□ 0.98
LGR5O75473 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.19■□□□□ 0.98
LGR5O75473 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.19■□□□□ 0.98
LGR5O75473 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGR5O75473 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.19■□□□□ 0.98
LGR5O75473 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
LGR5O75473 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.18■□□□□ 0.98
LGR5O75473 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LGR5O75473 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.18■□□□□ 0.98
LGR5O75473 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LGR5O75473 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.18■□□□□ 0.98
LGR5O75473 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.18■□□□□ 0.98
LGR5O75473 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.18■□□□□ 0.98
LGR5O75473 AC009947.2-201ENST00000444014 672 ntBASIC21.18■□□□□ 0.98
LGR5O75473 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.18■□□□□ 0.98
LGR5O75473 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.18■□□□□ 0.98
LGR5O75473 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.18■□□□□ 0.98
LGR5O75473 NEK4P2-201ENST00000580004 1012 ntBASIC21.18■□□□□ 0.98
LGR5O75473 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 CR769767.2-201ENST00000622735 460 ntBASIC21.18■□□□□ 0.98
LGR5O75473 AL121956.5-201ENST00000625261 221 ntBASIC21.18■□□□□ 0.98
LGR5O75473 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LGR5O75473 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 TEX21P-204ENST00000641479 1693 ntBASIC21.18■□□□□ 0.98
LGR5O75473 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGR5O75473 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.17■□□□□ 0.98
LGR5O75473 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.17■□□□□ 0.98
LGR5O75473 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 HOMER2P1-201ENST00000455653 964 ntBASIC21.17■□□□□ 0.98
LGR5O75473 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.17■□□□□ 0.98
LGR5O75473 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.17■□□□□ 0.98
LGR5O75473 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
LGR5O75473 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 AC140113.3-201ENST00000605663 199 ntBASIC21.17■□□□□ 0.98
LGR5O75473 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.17■□□□□ 0.98
LGR5O75473 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.17■□□□□ 0.98
LGR5O75473 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.17■□□□□ 0.98
LGR5O75473 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.17■□□□□ 0.98
LGR5O75473 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms