Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP002982.1-201ENST00000492365 877 ntBASIC17.83■□□□□ 0.44
HCN1O60741 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.83■□□□□ 0.44
HCN1O60741 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HCN1O60741 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HCN1O60741 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.83■□□□□ 0.44
HCN1O60741 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.83■□□□□ 0.44
HCN1O60741 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
HCN1O60741 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCN1O60741 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HCN1O60741 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HCN1O60741 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 BX088651.1-201ENST00000540551 451 ntBASIC17.82■□□□□ 0.44
HCN1O60741 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 CD177P1-201ENST00000606252 935 ntBASIC17.82■□□□□ 0.44
HCN1O60741 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HCN1O60741 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 TFP1-202ENST00000475455 1573 ntBASIC17.82■□□□□ 0.44
HCN1O60741 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HCN1O60741 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCN1O60741 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HCN1O60741 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.81■□□□□ 0.44
HCN1O60741 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.81■□□□□ 0.44
HCN1O60741 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HCN1O60741 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.81■□□□□ 0.44
HCN1O60741 AL355355.2-201ENST00000442321 338 ntBASIC17.81■□□□□ 0.44
HCN1O60741 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.81■□□□□ 0.44
HCN1O60741 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.81■□□□□ 0.44
HCN1O60741 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.81■□□□□ 0.44
HCN1O60741 AC026471.5-201ENST00000615068 467 ntBASIC17.81■□□□□ 0.44
HCN1O60741 REXO1L12P-201ENST00000622156 912 ntBASIC17.81■□□□□ 0.44
HCN1O60741 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HCN1O60741 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCN1O60741 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HCN1O60741 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HCN1O60741 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HCN1O60741 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HCN1O60741 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCN1O60741 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCN1O60741 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.8■□□□□ 0.44
HCN1O60741 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms