Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
GMDSO60547 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.86■□□□□ 0.29
GMDSO60547 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.86■□□□□ 0.29
GMDSO60547 AL121906.2-201ENST00000621597 723 ntBASIC16.86■□□□□ 0.29
GMDSO60547 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.86■□□□□ 0.29
GMDSO60547 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GMDSO60547 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
GMDSO60547 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GMDSO60547 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 TFP1-202ENST00000475455 1573 ntBASIC16.85■□□□□ 0.29
GMDSO60547 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GMDSO60547 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.85■□□□□ 0.29
GMDSO60547 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.85■□□□□ 0.29
GMDSO60547 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.85■□□□□ 0.29
GMDSO60547 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.85■□□□□ 0.29
GMDSO60547 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.85■□□□□ 0.29
GMDSO60547 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
GMDSO60547 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.85■□□□□ 0.29
GMDSO60547 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.85■□□□□ 0.29
GMDSO60547 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.85■□□□□ 0.29
GMDSO60547 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
GMDSO60547 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GMDSO60547 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 AC135050.7-201ENST00000624508 2218 ntBASIC16.85■□□□□ 0.29
GMDSO60547 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.85■□□□□ 0.29
GMDSO60547 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GMDSO60547 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.84■□□□□ 0.29
GMDSO60547 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 AC090340.1-201ENST00000620778 4980 ntBASIC16.84■□□□□ 0.29
GMDSO60547 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.84■□□□□ 0.29
GMDSO60547 AC106820.2-201ENST00000563775 3264 ntBASIC16.84■□□□□ 0.29
GMDSO60547 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
GMDSO60547 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 AC079598.2-202ENST00000546624 1451 ntBASIC16.84■□□□□ 0.29
GMDSO60547 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GMDSO60547 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.84■□□□□ 0.29
GMDSO60547 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GMDSO60547 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
GMDSO60547 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GMDSO60547 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GMDSO60547 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
GMDSO60547 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GMDSO60547 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms