Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PRICKLE3O43900 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE3O43900 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE3O43900 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE3O43900 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 NAPSB-206ENST00000562112 1266 ntBASIC18.33■□□□□ 0.52
PRICKLE3O43900 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE3O43900 AC097493.4-201ENST00000641197 219 ntBASIC18.33■□□□□ 0.52
PRICKLE3O43900 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE3O43900 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE3O43900 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE3O43900 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.52
PRICKLE3O43900 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 RNF165-205ENST00000588679 2904 ntBASIC18.32■□□□□ 0.52
PRICKLE3O43900 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 AC211429.1-201ENST00000415277 523 ntBASIC18.32■□□□□ 0.52
PRICKLE3O43900 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 EGLN1P1-201ENST00000531623 762 ntBASIC18.32■□□□□ 0.52
PRICKLE3O43900 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.32■□□□□ 0.52
PRICKLE3O43900 C2orf69P3-201ENST00000565542 1120 ntBASIC18.32■□□□□ 0.52
PRICKLE3O43900 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRICKLE3O43900 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.31■□□□□ 0.52
PRICKLE3O43900 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 INGX-201ENST00000359239 846 ntBASIC18.31■□□□□ 0.52
PRICKLE3O43900 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
PRICKLE3O43900 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 FAM210CP-201ENST00000445714 574 ntBASIC18.31■□□□□ 0.52
PRICKLE3O43900 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRICKLE3O43900 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.31■□□□□ 0.52
PRICKLE3O43900 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 AC145285.6-201ENST00000604632 637 ntBASIC18.3■□□□□ 0.52
PRICKLE3O43900 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 AC092338.2-201ENST00000568827 1415 ntBASIC18.3■□□□□ 0.52
PRICKLE3O43900 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRICKLE3O43900 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE3O43900 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms