Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
SURF4O15260 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SURF4O15260 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SURF4O15260 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SURF4O15260 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SURF4O15260 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SURF4O15260 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SURF4O15260 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SURF4O15260 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SURF4O15260 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SURF4O15260 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.23■□□□□ 0.35
SURF4O15260 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.23■□□□□ 0.35
SURF4O15260 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SURF4O15260 AL354751.1-201ENST00000412768 1863 ntBASIC17.23■□□□□ 0.35
SURF4O15260 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SURF4O15260 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.23■□□□□ 0.35
SURF4O15260 AC091874.3-201ENST00000512672 1195 ntBASIC17.23■□□□□ 0.35
SURF4O15260 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.23■□□□□ 0.35
SURF4O15260 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 ANO7L1-203ENST00000602586 1720 ntBASIC17.23■□□□□ 0.35
SURF4O15260 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SURF4O15260 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.23■□□□□ 0.35
SURF4O15260 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
SURF4O15260 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.23■□□□□ 0.35
SURF4O15260 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SURF4O15260 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SURF4O15260 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SURF4O15260 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.22■□□□□ 0.35
SURF4O15260 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.22■□□□□ 0.35
SURF4O15260 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.22■□□□□ 0.35
SURF4O15260 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SURF4O15260 AC083906.6-201ENST00000641366 219 ntBASIC17.22■□□□□ 0.35
SURF4O15260 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
SURF4O15260 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.22■□□□□ 0.35
SURF4O15260 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SURF4O15260 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SURF4O15260 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
SURF4O15260 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SURF4O15260 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.21■□□□□ 0.35
SURF4O15260 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.21■□□□□ 0.35
SURF4O15260 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.21■□□□□ 0.35
SURF4O15260 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.21■□□□□ 0.35
SURF4O15260 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.21■□□□□ 0.35
SURF4O15260 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SURF4O15260 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SURF4O15260 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.21■□□□□ 0.35
SURF4O15260 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SURF4O15260 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SURF4O15260 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SURF4O15260 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms