Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.31■□□□□ 0.84
SOX1O00570 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 DNAJB3-201ENST00000446806 729 ntBASIC20.31■□□□□ 0.84
SOX1O00570 IGHV3-22-201ENST00000520721 359 ntBASIC20.31■□□□□ 0.84
SOX1O00570 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX1O00570 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.31■□□□□ 0.84
SOX1O00570 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SOX1O00570 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
SOX1O00570 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SOX1O00570 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.3■□□□□ 0.84
SOX1O00570 AC034105.1-201ENST00000563488 319 ntBASIC20.3■□□□□ 0.84
SOX1O00570 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.3■□□□□ 0.84
SOX1O00570 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX1O00570 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX1O00570 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SOX1O00570 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SOX1O00570 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SOX1O00570 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
SOX1O00570 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.29■□□□□ 0.84
SOX1O00570 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.29■□□□□ 0.84
SOX1O00570 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
SOX1O00570 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.29■□□□□ 0.84
SOX1O00570 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.29■□□□□ 0.84
SOX1O00570 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SOX1O00570 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.29■□□□□ 0.84
SOX1O00570 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.29■□□□□ 0.84
SOX1O00570 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX1O00570 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX1O00570 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SOX1O00570 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX1O00570 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SOX1O00570 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX1O00570 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.28■□□□□ 0.84
SOX1O00570 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.28■□□□□ 0.84
SOX1O00570 KRT18P3-201ENST00000451602 1288 ntBASIC20.28■□□□□ 0.84
SOX1O00570 AP003733.1-201ENST00000491725 852 ntBASIC20.28■□□□□ 0.84
SOX1O00570 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.28■□□□□ 0.84
SOX1O00570 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX1O00570 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.28■□□□□ 0.84
SOX1O00570 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX1O00570 AC124864.1-201ENST00000623408 392 ntBASIC20.28■□□□□ 0.84
SOX1O00570 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX1O00570 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX1O00570 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX1O00570 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOX1O00570 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.27■□□□□ 0.84
SOX1O00570 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.27■□□□□ 0.84
SOX1O00570 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.27■□□□□ 0.84
SOX1O00570 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms