Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
KPNA3O00505 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.2■□□□□ 0.66
KPNA3O00505 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.2■□□□□ 0.66
KPNA3O00505 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.2■□□□□ 0.66
KPNA3O00505 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.2■□□□□ 0.66
KPNA3O00505 AP003041.3-201ENST00000527151 707 ntBASIC19.2■□□□□ 0.66
KPNA3O00505 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
KPNA3O00505 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.2■□□□□ 0.66
KPNA3O00505 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.2■□□□□ 0.66
KPNA3O00505 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.2■□□□□ 0.66
KPNA3O00505 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
KPNA3O00505 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.2■□□□□ 0.66
KPNA3O00505 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KPNA3O00505 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.19■□□□□ 0.66
KPNA3O00505 AL158211.5-201ENST00000623583 2518 ntBASIC19.19■□□□□ 0.66
KPNA3O00505 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KPNA3O00505 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
KPNA3O00505 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
KPNA3O00505 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KPNA3O00505 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.19■□□□□ 0.66
KPNA3O00505 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KPNA3O00505 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.18■□□□□ 0.66
KPNA3O00505 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KPNA3O00505 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 AC104076.2-201ENST00000448912 469 ntBASIC19.18■□□□□ 0.66
KPNA3O00505 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.18■□□□□ 0.66
KPNA3O00505 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KPNA3O00505 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
KPNA3O00505 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.18■□□□□ 0.66
KPNA3O00505 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KPNA3O00505 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KPNA3O00505 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KPNA3O00505 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KPNA3O00505 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.17■□□□□ 0.66
KPNA3O00505 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.17■□□□□ 0.66
KPNA3O00505 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.17■□□□□ 0.66
KPNA3O00505 AC006011.2-201ENST00000621313 1158 ntBASIC19.17■□□□□ 0.66
KPNA3O00505 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 AL590326.2-201ENST00000625139 305 ntBASIC19.17■□□□□ 0.66
KPNA3O00505 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KPNA3O00505 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KPNA3O00505 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
KPNA3O00505 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.17■□□□□ 0.66
KPNA3O00505 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms