Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
EIF3FO00303 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 FSCN1P1-201ENST00000568912 1481 ntBASIC18.67■□□□□ 0.58
EIF3FO00303 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EIF3FO00303 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EIF3FO00303 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EIF3FO00303 RPS2P55-201ENST00000397318 883 ntBASIC18.67■□□□□ 0.58
EIF3FO00303 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.67■□□□□ 0.58
EIF3FO00303 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 AC107956.1-201ENST00000494359 873 ntBASIC18.67■□□□□ 0.58
EIF3FO00303 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 AC233702.5-201ENST00000584107 538 ntBASIC18.67■□□□□ 0.58
EIF3FO00303 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
EIF3FO00303 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.67■□□□□ 0.58
EIF3FO00303 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EIF3FO00303 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EIF3FO00303 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 AL049812.1-201ENST00000432563 2267 ntBASIC18.66■□□□□ 0.58
EIF3FO00303 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.66■□□□□ 0.58
EIF3FO00303 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.66■□□□□ 0.58
EIF3FO00303 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 AL158047.1-201ENST00000445918 881 ntBASIC18.66■□□□□ 0.58
EIF3FO00303 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.66■□□□□ 0.58
EIF3FO00303 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EIF3FO00303 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.66■□□□□ 0.58
EIF3FO00303 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 MIR6786-201ENST00000616843 113 ntBASIC18.66■□□□□ 0.58
EIF3FO00303 AC011298.2-201ENST00000617989 482 ntBASIC18.66■□□□□ 0.58
EIF3FO00303 AC130371.2-201ENST00000619443 611 ntBASIC18.66■□□□□ 0.58
EIF3FO00303 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.66■□□□□ 0.58
EIF3FO00303 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EIF3FO00303 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EIF3FO00303 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EIF3FO00303 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.65■□□□□ 0.58
EIF3FO00303 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
EIF3FO00303 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.65■□□□□ 0.58
EIF3FO00303 B3GAT3P1-201ENST00000471720 806 ntBASIC18.65■□□□□ 0.58
EIF3FO00303 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.65■□□□□ 0.58
EIF3FO00303 CD177P1-201ENST00000606252 935 ntBASIC18.65■□□□□ 0.58
EIF3FO00303 DGCR10-201ENST00000609839 495 ntBASIC18.65■□□□□ 0.58
EIF3FO00303 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
EIF3FO00303 AC006333.2-201ENST00000607957 2099 ntBASIC18.65■□□□□ 0.58
EIF3FO00303 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
EIF3FO00303 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms