Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
DDX39AO00148 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DDX39AO00148 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DDX39AO00148 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX39AO00148 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX39AO00148 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX39AO00148 MIR1224-201ENST00000408193 85 ntBASIC21.47■■□□□ 1.03
DDX39AO00148 LIN28AP1-201ENST00000429574 405 ntBASIC21.47■■□□□ 1.03
DDX39AO00148 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX39AO00148 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX39AO00148 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
DDX39AO00148 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 ATP5G1P1-201ENST00000448724 379 ntBASIC21.46■■□□□ 1.03
DDX39AO00148 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.46■■□□□ 1.03
DDX39AO00148 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX39AO00148 AL023803.3-201ENST00000615559 522 ntBASIC21.46■■□□□ 1.03
DDX39AO00148 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
DDX39AO00148 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX39AO00148 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX39AO00148 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
DDX39AO00148 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.46■■□□□ 1.03
DDX39AO00148 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX39AO00148 AC092338.2-201ENST00000568827 1415 ntBASIC21.46■■□□□ 1.03
DDX39AO00148 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
DDX39AO00148 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
DDX39AO00148 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX39AO00148 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX39AO00148 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 TSPY21P-201ENST00000433481 731 ntBASIC21.45■■□□□ 1.02
DDX39AO00148 AC092865.7-201ENST00000641832 219 ntBASIC21.45■■□□□ 1.02
DDX39AO00148 AC093484.2-201ENST00000580996 2166 ntBASIC21.45■■□□□ 1.02
DDX39AO00148 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX39AO00148 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX39AO00148 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX39AO00148 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
DDX39AO00148 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX39AO00148 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
DDX39AO00148 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX39AO00148 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX39AO00148 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 TEX21P-204ENST00000641479 1693 ntBASIC21.44■■□□□ 1.02
DDX39AO00148 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
DDX39AO00148 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX39AO00148 AP003041.3-201ENST00000527151 707 ntBASIC21.44■■□□□ 1.02
DDX39AO00148 AL353719.1-201ENST00000566847 864 ntBASIC21.44■■□□□ 1.02
DDX39AO00148 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
DDX39AO00148 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 AC010331.1-201ENST00000611423 582 ntBASIC21.44■■□□□ 1.02
DDX39AO00148 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
DDX39AO00148 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX39AO00148 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX39AO00148 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.44■■□□□ 1.02
DDX39AO00148 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX39AO00148 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
DDX39AO00148 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX39AO00148 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX39AO00148 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX39AO00148 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX39AO00148 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX39AO00148 TSPY17P-201ENST00000450329 467 ntBASIC21.43■■□□□ 1.02
DDX39AO00148 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX39AO00148 AC073508.3-201ENST00000619697 1419 ntBASIC21.43■■□□□ 1.02
DDX39AO00148 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms