Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3FA6NER0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AL031133.1-201ENST00000406807 723 ntBASIC19■□□□□ 0.63
TBC1D3FA6NER0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AL441883.1-201ENST00000566170 1045 ntBASIC19■□□□□ 0.63
TBC1D3FA6NER0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19■□□□□ 0.63
TBC1D3FA6NER0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3FA6NER0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3FA6NER0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 AP000523.1-201ENST00000398242 1049 ntBASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 AL359075.1-203ENST00000462729 1002 ntBASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 AL358472.4-201ENST00000633140 710 ntBASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 MYC-208ENST00000641036 567 ntBASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3FA6NER0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 AC009947.2-201ENST00000444014 672 ntBASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms