Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 AC098934.4-201ENST00000564127 592 ntBASIC20.3■□□□□ 0.84
RCCD1A6NED2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RCCD1A6NED2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 AC067852.2-201ENST00000590513 2313 ntBASIC20.3■□□□□ 0.84
RCCD1A6NED2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCCD1A6NED2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 AL137784.2-201ENST00000607332 1000 ntBASIC20.29■□□□□ 0.84
RCCD1A6NED2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.29■□□□□ 0.84
RCCD1A6NED2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.29■□□□□ 0.84
RCCD1A6NED2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCCD1A6NED2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RCCD1A6NED2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.28■□□□□ 0.84
RCCD1A6NED2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RCCD1A6NED2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
RCCD1A6NED2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.28■□□□□ 0.84
RCCD1A6NED2 AC083880.1-201ENST00000608266 535 ntBASIC20.28■□□□□ 0.84
RCCD1A6NED2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 AL121829.2-201ENST00000620908 328 ntBASIC20.28■□□□□ 0.84
RCCD1A6NED2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.28■□□□□ 0.84
RCCD1A6NED2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCCD1A6NED2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
RCCD1A6NED2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 TSPY6P-201ENST00000448518 926 ntBASIC20.27■□□□□ 0.84
RCCD1A6NED2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 AC060766.5-201ENST00000590539 871 ntBASIC20.27■□□□□ 0.84
RCCD1A6NED2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCCD1A6NED2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.27■□□□□ 0.84
RCCD1A6NED2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RCCD1A6NED2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms