Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL445675.2-201ENST00000620291 557 ntBASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC131212.4-201ENST00000623606 975 ntBASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC073648.6-201ENST00000641589 218 ntBASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRBV6-4A0A1B0GX49 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL353807.1-201ENST00000427475 662 ntBASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL353708.3-201ENST00000610272 989 ntBASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 AL138781.2-201ENST00000617896 1843 ntBASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.46□□□□□ -0.26
TRBV6-4A0A1B0GX49 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CROCCP3-202ENST00000420820 1947 ntBASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms