Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 KRT18P20-201ENST00000548986 1279 ntBASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 AC134043.2-201ENST00000624206 2238 ntBASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 AC012414.1-201ENST00000556676 535 ntBASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 AC099398.1-201ENST00000567919 2776 ntBASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV12-1A0A0B4J245 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV12-1A0A0B4J245 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV12-1A0A0B4J245 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV12-1A0A0B4J245 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 CYP21A1P-202ENST00000354927 1481 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms