Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 C1QL1P1-201ENST00000568105 661 ntBASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-3A0A0A0MS03 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.89■□□□□ 0.46
TRBV5-3A0A0A0MS03 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 AL133373.2-201ENST00000623187 2828 ntBASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-3A0A0A0MS03 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 KRT8P41-201ENST00000533985 1514 ntBASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 AC126763.1-201ENST00000552015 2118 ntBASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-3A0A0A0MS03 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 UNC93B4-201ENST00000505679 747 ntBASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 AC005332.8-201ENST00000622750 2735 ntBASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 HEIH-201ENST00000623091 1652 ntBASIC17.87■□□□□ 0.45
TRBV5-3A0A0A0MS03 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRBV5-3A0A0A0MS03 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-3A0A0A0MS03 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-3A0A0A0MS03 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms