Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.13□□□□□ -1.75
U3KQE9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
U3KQE9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
U3KQE9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
U3KQE9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 AC025031.4-201ENST00000621248 3271 ntBASIC4.12□□□□□ -1.75
U3KQE9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 AL592437.2-201ENST00000421655 2434 ntBASIC4.12□□□□□ -1.75
U3KQE9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 Y_RNA.81-201ENST00000362997 102 ntBASIC4.12□□□□□ -1.75
U3KQE9 OR1L6-202ENST00000373684 1044 ntBASIC4.12□□□□□ -1.75
U3KQE9 RNU6-318P-201ENST00000384283 103 ntBASIC4.12□□□□□ -1.75
U3KQE9 RNU6-804P-201ENST00000384286 107 ntBASIC4.12□□□□□ -1.75
U3KQE9 SNORA16A-201ENST00000384342 137 ntBASIC4.12□□□□□ -1.75
U3KQE9 HSPA8P15-201ENST00000401676 786 ntBASIC4.12□□□□□ -1.75
U3KQE9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 SRSF1P1-201ENST00000424058 520 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC091390.3-201ENST00000426478 338 ntBASIC4.12□□□□□ -1.75
U3KQE9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 MTND6P12-201ENST00000428247 522 ntBASIC4.12□□□□□ -1.75
U3KQE9 RPL19P16-201ENST00000433839 588 ntBASIC4.12□□□□□ -1.75
U3KQE9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 AC064862.4-201ENST00000442180 334 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC005532.2-201ENST00000467154 373 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC092754.1-201ENST00000472975 479 ntBASIC4.12□□□□□ -1.75
U3KQE9 HMGB3P16-201ENST00000508037 287 ntBASIC4.12□□□□□ -1.75
U3KQE9 RN7SKP49-201ENST00000516675 260 ntBASIC4.12□□□□□ -1.75
U3KQE9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.12□□□□□ -1.75
U3KQE9 RNA5SP290-201ENST00000517133 127 ntBASIC4.12□□□□□ -1.75
U3KQE9 RNA5SP291-201ENST00000517222 105 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC027369.5-201ENST00000533838 755 ntBASIC4.12□□□□□ -1.75
U3KQE9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 H3F3AP1-201ENST00000559984 334 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 AC006272.2-201ENST00000594725 163 ntBASIC4.12□□□□□ -1.75
U3KQE9 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.12□□□□□ -1.75
U3KQE9 AC099506.2-201ENST00000623074 221 ntBASIC4.12□□□□□ -1.75
U3KQE9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
U3KQE9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.12□□□□□ -1.75
U3KQE9 AL353743.1-202ENST00000431724 1695 ntBASIC4.12□□□□□ -1.75
U3KQE9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.12□□□□□ -1.75
U3KQE9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
U3KQE9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
U3KQE9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.11□□□□□ -1.75
U3KQE9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.11□□□□□ -1.75
U3KQE9 MIR410-201ENST00000362222 80 ntBASIC4.11□□□□□ -1.75
U3KQE9 RNU6-78P-201ENST00000362897 107 ntBASIC4.11□□□□□ -1.75
U3KQE9 RNU1-19P-201ENST00000363306 165 ntBASIC4.11□□□□□ -1.75
U3KQE9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 RNU6-1286P-201ENST00000383871 107 ntBASIC4.11□□□□□ -1.75
U3KQE9 RNU6-741P-201ENST00000383889 107 ntBASIC4.11□□□□□ -1.75
U3KQE9 Y_RNA.580-201ENST00000391004 95 ntBASIC4.11□□□□□ -1.75
U3KQE9 RN7SKP114-201ENST00000410327 279 ntBASIC4.11□□□□□ -1.75
U3KQE9 RAB9AP3-201ENST00000412737 573 ntBASIC4.11□□□□□ -1.75
U3KQE9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.11□□□□□ -1.75
U3KQE9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.11□□□□□ -1.75
U3KQE9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.11□□□□□ -1.75
U3KQE9 RAB9AP1-201ENST00000449393 573 ntBASIC4.11□□□□□ -1.75
U3KQE9 ANP32BP2-201ENST00000454525 545 ntBASIC4.11□□□□□ -1.75
U3KQE9 AC090602.1-201ENST00000469695 252 ntBASIC4.11□□□□□ -1.75
U3KQE9 RPL23AP75-201ENST00000491601 451 ntBASIC4.11□□□□□ -1.75
U3KQE9 AC004980.4-201ENST00000513375 203 ntBASIC4.11□□□□□ -1.75
U3KQE9 SNORA27.4-201ENST00000516650 95 ntBASIC4.11□□□□□ -1.75
U3KQE9 MTND5P41-201ENST00000517498 206 ntBASIC4.11□□□□□ -1.75
U3KQE9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.11□□□□□ -1.75
U3KQE9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.11□□□□□ -1.75
U3KQE9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.11□□□□□ -1.75
U3KQE9 HMGB1P14-201ENST00000557424 591 ntBASIC4.11□□□□□ -1.75
U3KQE9 MIR1273E-201ENST00000581165 102 ntBASIC4.11□□□□□ -1.75
U3KQE9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.11□□□□□ -1.75
U3KQE9 AC010928.2-201ENST00000588017 287 ntBASIC4.11□□□□□ -1.75
U3KQE9 AC138965.3-201ENST00000623875 498 ntBASIC4.11□□□□□ -1.75
U3KQE9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
U3KQE9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
U3KQE9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.11□□□□□ -1.75
U3KQE9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
U3KQE9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
U3KQE9 AC092376.2-201ENST00000622621 4116 ntBASIC4.1□□□□□ -1.75
U3KQE9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
U3KQE9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
U3KQE9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.1□□□□□ -1.75
U3KQE9 AC009541.1-201ENST00000438279 2662 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms