Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.294-201ENST00000364916 102 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.329-201ENST00000365209 107 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-72P-201ENST00000384285 79 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RPL23AP17-201ENST00000401064 499 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RPL12P46-201ENST00000436610 195 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 HSPE1P13-201ENST00000451143 297 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-572P-201ENST00000516724 80 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.710-201ENST00000516975 110 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC130365.2-201ENST00000525882 1201 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC005224.3-201ENST00000584683 2140 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC005255.1-201ENST00000593748 216 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AL589674.2-201ENST00000604304 337 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR6826-201ENST00000617808 98 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.35-201ENST00000362601 101 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-873P-201ENST00000363833 107 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP242-201ENST00000364171 118 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.521-201ENST00000384560 114 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR15B-201ENST00000385045 98 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU2-50P-201ENST00000410494 143 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC009963.1-201ENST00000417265 157 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 RPS27P1-201ENST00000450552 247 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC114728.1-201ENST00000488289 483 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AL049874.1-201ENST00000489560 388 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC090958.1-201ENST00000511122 351 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AP003327.1-201ENST00000529684 127 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AL391903.3-201ENST00000612158 163 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 AC245014.3-201ENST00000618589 347 ntBASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHGA4Q9Y5G9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP273-201ENST00000362484 113 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 RNY1P11-201ENST00000363759 113 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-801P-201ENST00000364087 105 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.245-201ENST00000364493 95 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.388-201ENST00000383919 113 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.393-201ENST00000383936 102 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC099336.2-201ENST00000422457 254 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC099560.2-201ENST00000457554 255 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC023424.1-201ENST00000496058 459 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.667-201ENST00000516212 107 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC136628.3-201ENST00000521868 290 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC068768.2-201ENST00000602352 343 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AL391261.4-201ENST00000616012 481 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AL137067.2-201ENST00000621202 131 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC116667.2-201ENST00000641075 823 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AC020656.2-201ENST00000613291 5309 ntBASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHGA4Q9Y5G9 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms