Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC010332.2-201ENST00000613083 1904 ntBASIC6.17□□□□□ -1.42
PDZRN3Q9UPQ7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 SNORD113-8-201ENST00000363497 74 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 SNORD113.2-201ENST00000364166 89 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-290P-201ENST00000365212 101 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 SNORA40-201ENST00000388090 126 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AC016769.3-201ENST00000396562 315 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 CKS1BP6-201ENST00000424932 240 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 RPL35AP22-201ENST00000436855 335 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 RPL23AP56-201ENST00000460778 453 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 RNY3P16-201ENST00000516338 101 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-1234P-201ENST00000516877 103 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AC134698.5-201ENST00000519444 336 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 SYF2P1-201ENST00000550658 413 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 MIR5582-201ENST00000579697 68 ntBASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.16□□□□□ -1.42
PDZRN3Q9UPQ7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC138393.1-203ENST00000327086 343 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-755P-201ENST00000364400 103 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-434P-201ENST00000384376 107 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 RNA5SP89-201ENST00000410300 108 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 RNU2-6P-201ENST00000411404 190 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 EIF4HP2-201ENST00000424380 563 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 TOMM20P4-201ENST00000427861 435 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 CALM2P2-201ENST00000428512 440 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC018437.1-201ENST00000492214 406 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 LSM6P2-201ENST00000552208 177 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 MIR4273-201ENST00000582824 84 ntBASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.15□□□□□ -1.42
PDZRN3Q9UPQ7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.15□□□□□ -1.43
PDZRN3Q9UPQ7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 OR56B2P-202ENST00000641377 2453 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AL357515.1-201ENST00000402967 542 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 RPL17P36-201ENST00000420302 549 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AC234779.1-201ENST00000425910 285 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AL162591.2-201ENST00000449634 317 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 RNA5SP392-201ENST00000516905 112 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AC090281.1-201ENST00000523019 276 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 RANP3-201ENST00000530970 276 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AP004242.1-201ENST00000533701 349 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 COX6CP3-201ENST00000580869 223 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AC174048.1-201ENST00000603389 144 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AL049794.2-201ENST00000616301 365 ntBASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
PDZRN3Q9UPQ7 AC009951.1-201ENST00000623674 2614 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-97P-201ENST00000363387 104 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.234-201ENST00000364409 97 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL033519.2-201ENST00000403958 392 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 UBE2V1P13-201ENST00000436983 439 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC016696.1-201ENST00000446949 318 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC000111.2-201ENST00000448200 210 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 ISCUP1-201ENST00000454451 448 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.638-201ENST00000459374 113 ntBASIC6.13□□□□□ -1.43
PDZRN3Q9UPQ7 RN7SL517P-201ENST00000462240 305 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms