Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BHLHE41Q9C0J9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AL139811.1-201ENST00000424779 2299 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 Y_RNA.20-201ENST00000362479 113 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 SNORD14B-201ENST00000364533 90 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 RNA5SP235-201ENST00000365411 114 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-708P-201ENST00000384217 107 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 MIR223-201ENST00000385204 110 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-130P-201ENST00000411112 103 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 C4BPAP2-201ENST00000428434 478 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 MTND3P9-201ENST00000429526 346 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 RPL23AP45-201ENST00000476406 468 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 OR51K1P-201ENST00000510214 950 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AL590705.4-201ENST00000532209 134 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 MIR3936-201ENST00000584304 110 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 MIR7155-201ENST00000615925 56 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC137590.2-201ENST00000619709 240 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 AC243829.7-201ENST00000633081 225 ntBASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BHLHE41Q9C0J9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
BHLHE41Q9C0J9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
BHLHE41Q9C0J9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
BHLHE41Q9C0J9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.65
BHLHE41Q9C0J9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
BHLHE41Q9C0J9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 DEFB108F-201ENST00000344638 222 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 U3.13-201ENST00000364804 214 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SNORA70.10-201ENST00000384515 134 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AL022722.2-201ENST00000402519 180 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 RNU6-121P-201ENST00000410525 99 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 RNU2-71P-201ENST00000411395 189 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC091390.3-201ENST00000426478 338 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC004383.1-201ENST00000438135 289 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC074250.1-201ENST00000511117 192 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC109479.2-201ENST00000517842 174 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 MIR4700-201ENST00000578311 74 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC105254.2-201ENST00000603636 436 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC009318.2-201ENST00000610917 651 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AC126915.2-201ENST00000610957 190 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AL161629.2-201ENST00000615347 275 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 AP000560.1-201ENST00000624150 1937 ntBASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BHLHE41Q9C0J9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms