Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 TRAV37-201ENST00000553906 342 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC006077.1-201ENST00000604746 343 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL138713.1-201ENST00000624026 2130 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC011978.2-201ENST00000569835 2054 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 HSPE1P11-201ENST00000339579 310 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.100-201ENST00000363141 102 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.259-201ENST00000364619 101 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 RNU6-641P-201ENST00000384006 107 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 MIR514A2-201ENST00000385131 88 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 MIR514A3-201ENST00000385132 88 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL606923.1-201ENST00000406616 190 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 HSPE1P1-201ENST00000421494 318 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 MED13P1-201ENST00000428342 171 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 SNORD121B-201ENST00000458838 81 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 RPL23AP62-201ENST00000463396 453 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 MTND4P17-201ENST00000470444 350 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC116562.3-201ENST00000506136 177 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC016065.2-201ENST00000514530 444 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 SNORA70.19-201ENST00000516717 90 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 RNU6-798P-201ENST00000516912 103 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC068587.5-201ENST00000528506 175 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC020661.2-201ENST00000560114 134 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC093249.1-201ENST00000567049 203 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC004908.2-201ENST00000609090 574 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AC090971.5-201ENST00000621102 293 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 AL133216.2-202ENST00000634512 349 ntBASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM2Q96JY6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.315-201ENST00000365117 102 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RNU6-38P-201ENST00000384085 107 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RNU6-903P-201ENST00000391270 109 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RN7SKP177-201ENST00000410567 355 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RPS15AP40-201ENST00000419621 391 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RNU6-333P-201ENST00000459117 107 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC092436.1-201ENST00000506450 503 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.665-201ENST00000516177 98 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RNU2-10P-201ENST00000516375 211 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RPL7P20-201ENST00000520308 745 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC136624.4-201ENST00000573044 370 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM2Q96JY6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 RNU6-552P-201ENST00000362869 119 ntBASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 SNORA70C-201ENST00000384538 135 ntBASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.579-201ENST00000390939 94 ntBASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 RPL21P3-201ENST00000395517 478 ntBASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 RNU4-6P-201ENST00000410804 122 ntBASIC3.92□□□□□ -1.78
PDLIM2Q96JY6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms