Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL353705.1-201ENST00000433468 480 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 FABP5P15-201ENST00000453566 214 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 APOOP4-201ENST00000513530 597 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 RNU7-51P-201ENST00000516560 62 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 RNU6-1092P-201ENST00000516955 87 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC026407.1-201ENST00000518369 204 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AP003467.2-201ENST00000520175 319 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC010620.2-201ENST00000600135 313 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AF131215.7-201ENST00000602443 707 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC012065.4-201ENST00000602445 679 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 DUSP12P1-201ENST00000612874 516 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC090617.7-201ENST00000623952 126 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA1Q96BD8 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA1Q96BD8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA1Q96BD8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC138915.1-201ENST00000565427 1685 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SKA1Q96BD8 RNU5E-6P-201ENST00000365574 115 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 SNORD17-201ENST00000390930 237 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 RPL26P27-201ENST00000414397 437 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 GTF2IP20-201ENST00000431663 360 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 RPS15AP5-201ENST00000436276 388 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AL445567.1-201ENST00000439121 144 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 ST13P20-201ENST00000447996 1065 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC010587.1-201ENST00000505809 469 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC007363.1-201ENST00000604736 620 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC108479.2-201ENST00000617314 601 ntBASIC3.45□□□□□ -1.86
SKA1Q96BD8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA1Q96BD8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SKA1Q96BD8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SKA1Q96BD8 HSPE1P11-201ENST00000339579 310 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC098614.2-201ENST00000426040 255 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 CETN4P-201ENST00000432407 469 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 OR2B8P-201ENST00000432841 938 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 WASF1P1-201ENST00000447560 1131 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 RPL27AP5-201ENST00000469428 449 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 RPL31P41-201ENST00000477967 372 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 RPS29P20-201ENST00000489592 171 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 RPL39P36-201ENST00000490784 156 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 SEM1P1-201ENST00000506694 209 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 NDUFB4P2-201ENST00000509515 391 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC113155.1-201ENST00000511141 769 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 SNORA70.19-201ENST00000516717 90 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 RNA5SP337-201ENST00000517007 109 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 AP003181.2-201ENST00000528941 181 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 RPL21P5-201ENST00000554662 472 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 AC109446.2-201ENST00000567872 497 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 BNIP3P8-201ENST00000597863 560 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 CKS1BP3-201ENST00000600888 237 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 BNIP3P9-201ENST00000603714 553 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 AL358072.1-201ENST00000604156 575 ntBASIC3.44□□□□□ -1.86
SKA1Q96BD8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SKA1Q96BD8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SKA1Q96BD8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SKA1Q96BD8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 CR848007.1-201ENST00000442354 1699 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 AC110491.1-201ENST00000562191 2010 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SKA1Q96BD8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SKA1Q96BD8 RNU1-73P-201ENST00000383971 164 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 RNU6-14P-201ENST00000384630 106 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 MT-TH-201ENST00000387441 69 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 RN7SKP220-201ENST00000410611 288 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 ISCA1P2-201ENST00000438679 421 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 HMGB3P12-201ENST00000438745 556 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 AC008155.2-201ENST00000464337 397 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 AC128713.1-201ENST00000471495 306 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 MTND1P3-201ENST00000484956 952 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms