Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNA5SP184-201ENST00000411071 108 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC009963.1-201ENST00000417265 157 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.16□□□□□ -2.06
CASQ1P31415 MTCYBP32-201ENST00000427945 1084 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 MTCYBP45-201ENST00000435243 565 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AL451074.3-201ENST00000437709 472 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC009238.1-201ENST00000442165 424 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC009237.6-201ENST00000446969 424 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 ATG12P2-201ENST00000456830 416 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AL160314.1-201ENST00000490836 438 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 CAB39P1-201ENST00000502277 460 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CASQ1P31415 AC022861.1-201ENST00000522981 663 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.16□□□□□ -2.06
CASQ1P31415 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CASQ1P31415 AL049838.1-201ENST00000563647 981 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.16□□□□□ -2.06
CASQ1P31415 RPP40P2-201ENST00000603596 712 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC007179.3-201ENST00000604976 235 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AL138478.1-201ENST00000612252 832 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 AC084824.4-201ENST00000620106 731 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.16□□□□□ -2.06
CASQ1P31415 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.16□□□□□ -2.06
CASQ1P31415 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
CASQ1P31415 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.16□□□□□ -2.06
CASQ1P31415 RNU6-1300P-201ENST00000391046 108 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 HMGN2P39-201ENST00000398005 273 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 CCNG1P1-201ENST00000406783 885 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 TPMTP3-201ENST00000411928 735 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 NUP35P1-201ENST00000422734 947 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.15□□□□□ -2.07
CASQ1P31415 SNRPEP9-201ENST00000436794 238 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 GXYLT1P1-201ENST00000446657 490 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.15□□□□□ -2.07
CASQ1P31415 AL109933.2-201ENST00000452651 260 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.15□□□□□ -2.07
CASQ1P31415 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.15□□□□□ -2.07
CASQ1P31415 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.15□□□□□ -2.07
CASQ1P31415 AP005639.2-201ENST00000527592 928 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.15□□□□□ -2.07
CASQ1P31415 AC125611.1-201ENST00000549563 229 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 AC012435.1-202ENST00000568772 240 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 MIR3122-201ENST00000577243 73 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 MIR4637-201ENST00000582405 84 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
CASQ1P31415 AC106052.1-201ENST00000608029 497 ntBASIC2.15□□□□□ -2.07
CASQ1P31415 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.14□□□□□ -2.07
CASQ1P31415 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CASQ1P31415 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CASQ1P31415 RNA5SP240-201ENST00000365355 128 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 RNU6-650P-201ENST00000365658 111 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CASQ1P31415 AL356967.1-201ENST00000406305 431 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.14□□□□□ -2.07
CASQ1P31415 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.14□□□□□ -2.07
CASQ1P31415 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.14□□□□□ -2.07
CASQ1P31415 COX6CP18-201ENST00000448769 222 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.14□□□□□ -2.07
CASQ1P31415 AC020699.1-201ENST00000505161 445 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AC010468.3-201ENST00000508225 458 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 RNU4-29P-201ENST00000515943 174 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 HMGN1P28-201ENST00000521340 364 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.14□□□□□ -2.07
CASQ1P31415 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.14□□□□□ -2.07
CASQ1P31415 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.14□□□□□ -2.07
CASQ1P31415 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.14□□□□□ -2.07
CASQ1P31415 MIR1254-2-201ENST00000579553 63 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AC090897.2-201ENST00000581715 130 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AP001542.2-201ENST00000593141 364 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AC104307.1-201ENST00000616142 196 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 AC007490.1-201ENST00000624321 703 ntBASIC2.14□□□□□ -2.07
CASQ1P31415 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CASQ1P31415 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CASQ1P31415 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CASQ1P31415 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CASQ1P31415 U3.13-201ENST00000364804 214 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 RNU1-73P-201ENST00000383971 164 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 NDUFS5P1-201ENST00000405668 289 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 SNORD56-201ENST00000413522 71 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AL161449.1-201ENST00000414531 1199 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AL451054.2-201ENST00000420896 202 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 MTCO2P5-201ENST00000422621 426 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AL353729.1-201ENST00000425044 720 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AC092427.1-201ENST00000439177 601 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 CKS1BP2-201ENST00000497342 240 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CASQ1P31415 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 RNA5SP356-201ENST00000515972 94 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 SNORA31.23-201ENST00000517219 133 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.13□□□□□ -2.07
CASQ1P31415 AP001189.2-201ENST00000527320 189 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 AC234778.2-201ENST00000566241 354 ntBASIC2.13□□□□□ -2.07
CASQ1P31415 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.13□□□□□ -2.07
CASQ1P31415 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms