Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP1P23763 YWHAEP1-201ENST00000453697 763 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC009963.3-201ENST00000458090 486 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
VAMP1P23763 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.38□□□□□ -1.71
VAMP1P23763 SCARNA16.4-201ENST00000516956 187 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.38□□□□□ -1.71
VAMP1P23763 IGKV3D-25-201ENST00000519599 235 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC007991.1-201ENST00000522680 631 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP1P23763 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP1P23763 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 AC023442.1-201ENST00000531247 422 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.38□□□□□ -1.71
VAMP1P23763 CR383656.8-201ENST00000549046 145 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RN7SL708P-201ENST00000580952 299 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 MIR5010-201ENST00000582846 120 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC006504.6-201ENST00000590142 199 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC079315.1-201ENST00000602952 623 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC020634.1-201ENST00000608701 549 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.38□□□□□ -1.71
VAMP1P23763 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 AC007823.1-201ENST00000569932 1566 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP1P23763 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 MTND5P9-201ENST00000503854 1755 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 Y_RNA.48-201ENST00000362710 103 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP1P23763 SNORA41-201ENST00000384675 132 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 HMGB1P20-201ENST00000402555 677 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 RNU6-174P-201ENST00000410406 106 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 RNU6-55P-201ENST00000411092 107 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AL590139.1-201ENST00000416267 400 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP1P23763 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP1P23763 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 BTF3P6-201ENST00000448054 499 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 RNA5SP340-201ENST00000517132 107 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 AC022404.1-201ENST00000555320 273 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 HMGN1P26-201ENST00000558737 303 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC020661.2-201ENST00000560114 134 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP1P23763 AC025281.1-201ENST00000567026 265 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC015720.2-201ENST00000567709 334 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP1P23763 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VAMP1P23763 MIR6823-201ENST00000622118 61 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 U6.98-201ENST00000637157 84 ntBASIC4.37□□□□□ -1.71
VAMP1P23763 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP1P23763 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP1P23763 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VAMP1P23763 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
VAMP1P23763 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 Y_RNA.162-201ENST00000363683 102 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 Y_RNA.326-201ENST00000365176 113 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP1P23763 Y_RNA.422-201ENST00000384054 114 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 MIR431-201ENST00000385266 114 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VAMP1P23763 RNU6-308P-201ENST00000390957 107 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 AC074117.2-201ENST00000417130 397 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 EIF4EP2-201ENST00000422816 654 ntBASIC4.36□□□□□ -1.71
VAMP1P23763 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.36□□□□□ -1.71
VAMP1P23763 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms