Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL137790.1-201ENST00000634283 177 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 MTND4P16-201ENST00000466108 1367 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC110491.1-201ENST00000562191 2010 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RNU6-778P-201ENST00000363269 103 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RNU5A-8P-201ENST00000364102 114 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL139397.2-201ENST00000404529 772 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 COTL1P1-201ENST00000422309 375 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL022400.1-201ENST00000423946 935 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 SKA2P1-201ENST00000425592 390 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 HMGB1P9-201ENST00000429856 646 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 GPM6BP2-201ENST00000432046 144 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL831737.1-201ENST00000441288 271 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 GPM6BP1-201ENST00000446387 144 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC108059.3-201ENST00000456388 214 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC098591.2-201ENST00000510152 315 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 RNU1-103P-201ENST00000516502 125 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 MTATP6P15-201ENST00000527233 835 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 LARP7P3-201ENST00000579888 337 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 BNIP3P40-201ENST00000596017 556 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC245884.10-201ENST00000597355 337 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL355472.4-201ENST00000610233 626 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 U2.21-201ENST00000637295 81 ntBASIC2.85□□□□□ -1.95
HLA-DPA1P20036 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPA1P20036 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 ELF2P3-201ENST00000445099 1506 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 UBE2L2-201ENST00000254302 429 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 RNU6-253P-201ENST00000384730 105 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 MIR181A2-201ENST00000384863 110 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC096649.2-201ENST00000416186 393 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC098831.1-201ENST00000440661 216 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 COX6CP2-201ENST00000444980 225 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 OSTCP8-201ENST00000445117 448 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 RPF2P2-201ENST00000504693 896 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 HSPE1P23-201ENST00000509838 286 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 EIF4BP1-201ENST00000554881 351 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC105148.1-201ENST00000604961 409 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC079416.3-201ENST00000624479 549 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 MIR3199-2-201ENST00000636243 86 ntBASIC2.84□□□□□ -1.95
HLA-DPA1P20036 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HLA-DPA1P20036 AC006378.2-201ENST00000623178 2476 ntBASIC2.84□□□□□ -1.96
HLA-DPA1P20036 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HLA-DPA1P20036 AC010889.1-201ENST00000566193 2666 ntBASIC2.84□□□□□ -1.96
HLA-DPA1P20036 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DPA1P20036 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AL359693.1-201ENST00000614959 2407 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RNU6-1284P-201ENST00000363701 100 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RNU6-512P-201ENST00000364438 103 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RNU6-7-201ENST00000364784 107 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 Y_RNA.302-201ENST00000364997 102 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RNU6-8-201ENST00000365467 107 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms