Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
UBE2D4Q9Y2X8 AC010329.5-201ENST00000623497 2174 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 ZNF29P-201ENST00000225587 168 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 MIR764-201ENST00000390811 85 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 RNU6-1328P-201ENST00000410938 106 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 GTF2IP20-201ENST00000431663 360 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 MTCYBP12-201ENST00000440559 1134 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC009474.2-201ENST00000451383 136 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 HMGN2P23-201ENST00000456759 269 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 RNU1-123P-201ENST00000458950 160 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 RN7SKP179-201ENST00000516126 217 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 SCARNA17.1-201ENST00000516211 143 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 SCARNA17.2-201ENST00000516334 143 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AP003033.1-201ENST00000527244 415 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC010186.2-204ENST00000537668 439 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC067805.1-201ENST00000559344 470 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AC103987.3-201ENST00000582071 292 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 AL512598.1-201ENST00000610158 273 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 SCARNA17.4-201ENST00000614296 143 ntBASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
UBE2D4Q9Y2X8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 RNU2-41P-201ENST00000410991 178 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 RPL30P13-201ENST00000418873 348 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 CYCSP49-201ENST00000420810 319 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC092573.2-201ENST00000434546 243 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 RPS20P22-201ENST00000473700 357 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 SNORA70.16-201ENST00000516390 95 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC090821.2-201ENST00000523552 176 ntBASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBE2D4Q9Y2X8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 MIR378A-201ENST00000362177 66 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 RNU4-23P-201ENST00000362839 140 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 RNA5SP125-201ENST00000364843 120 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 FGF7P8-201ENST00000402994 292 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL590084.1-201ENST00000407885 387 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL109913.1-201ENST00000421173 514 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 FABP5P3-201ENST00000437960 408 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 RPS29P29-201ENST00000456396 171 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 SUMO2P2-201ENST00000456482 255 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC093752.1-206ENST00000511823 336 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 RN7SKP96-201ENST00000516948 297 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC004923.2-201ENST00000529649 369 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 MIR4504-201ENST00000577413 92 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC024619.4-201ENST00000580924 316 ntBASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBE2D4Q9Y2X8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms