Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC073055.1-201ENST00000456901 1621 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-1243P-201ENST00000364028 107 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 OR1L1-202ENST00000373686 1083 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-837P-201ENST00000391056 108 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RPL7P27-201ENST00000403775 720 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-1077P-201ENST00000410506 102 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RN7SKP51-201ENST00000410781 304 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 ZNF90P2-204ENST00000419323 1075 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 RABEPKP1-201ENST00000440529 1026 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC087879.1-201ENST00000474343 374 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC025459.1-201ENST00000504072 156 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC022690.1-201ENST00000526681 550 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AL390240.1-201ENST00000612950 384 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AC107905.1-201ENST00000616204 426 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 MIR6076-201ENST00000617521 113 ntBASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.61□□□□□ -2.15
PHRF1Q9P1Y6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 MIR373-201ENST00000362273 69 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 MIR524-201ENST00000385242 87 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 MIR1303-201ENST00000408625 86 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 VN1R108P-201ENST00000431580 830 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AC087343.1-201ENST00000477341 475 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AP004371.1-201ENST00000525240 214 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 RPL21P5-201ENST00000554662 472 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AC123912.3-201ENST00000600907 1367 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 BNIP3P7-201ENST00000605641 516 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 AC008962.1-201ENST00000605729 304 ntBASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
PHRF1Q9P1Y6 SNORA14A-201ENST00000364773 135 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-891P-201ENST00000384280 111 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 MTATP6P31-201ENST00000406985 692 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 RPS20P15-201ENST00000412792 311 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 MTCYBP34-201ENST00000439552 670 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 ATG12P2-201ENST00000456830 416 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 AC104057.1-201ENST00000515547 497 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 C1DP5-201ENST00000525775 383 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 NBEAP1-201ENST00000554452 979 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 AL133507.1-201ENST00000605269 557 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 AL161734.1-201ENST00000609720 557 ntBASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PHRF1Q9P1Y6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
PHRF1Q9P1Y6 HMGB1P5-201ENST00000255320 642 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-1249P-201ENST00000363237 111 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-1293P-201ENST00000384077 107 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 MIR625-201ENST00000385047 85 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 PRRC2CP1-201ENST00000404428 159 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 RPS3AP44-201ENST00000425466 790 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 CDC42P4-201ENST00000510507 563 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC105914.1-201ENST00000511798 226 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC087373.1-201ENST00000524920 491 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 DUXAP5-201ENST00000529668 529 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC020658.4-201ENST00000613987 684 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC008083.4-201ENST00000615076 444 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-156P-201ENST00000621869 107 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 MIR421-201ENST00000365696 85 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AL355497.1-201ENST00000406262 551 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 HMGN2P30-201ENST00000423237 256 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 RPL7P29-201ENST00000437151 728 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC074029.2-201ENST00000551045 634 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 UBE2L4-201ENST00000587688 464 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 AC006338.1-201ENST00000618453 749 ntBASIC1.58□□□□□ -2.16
PHRF1Q9P1Y6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 MTCO1P57-201ENST00000432182 261 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 SDCBPP1-201ENST00000440192 890 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms