Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 AC105137.2-201ENST00000569073 466 ntBASIC6.79□□□□□ -1.32
RTN4Q9NQC3 AC005357.1-201ENST00000588399 301 ntBASIC6.79□□□□□ -1.32
RTN4Q9NQC3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTN4Q9NQC3 LINC02555-201ENST00000563933 1951 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 AL731566.1-201ENST00000620490 1937 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 SNORA7A-201ENST00000384765 139 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 AP000567.1-201ENST00000406413 156 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 RN7SKP121-201ENST00000410842 305 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 OR7H2P-201ENST00000513483 306 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 SNORA31.6-201ENST00000516241 130 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 RNU5B-3P-201ENST00000516601 115 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 AL137067.2-201ENST00000621202 131 ntBASIC6.78□□□□□ -1.32
RTN4Q9NQC3 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTN4Q9NQC3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC126755.2-208ENST00000327792 462 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC138969.1-213ENST00000331436 462 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 Y_RNA.257-201ENST00000364596 102 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RNU4-56P-201ENST00000364700 142 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC092634.1-201ENST00000366505 199 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RNU6-708P-201ENST00000384217 107 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 MIR27A-201ENST00000385073 78 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 MRPL35P1-201ENST00000404272 572 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 SNORA77.2-201ENST00000408571 112 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC016700.2-201ENST00000446011 156 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RN7SL326P-201ENST00000477493 296 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC091874.1-201ENST00000511402 339 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RNA5SP418-201ENST00000515951 117 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AP000867.2-201ENST00000532468 320 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 MIR3936-201ENST00000584304 110 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 AC027506.1-201ENST00000621395 198 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
RTN4Q9NQC3 RLIMP1-201ENST00000339626 1680 ntBASIC6.77□□□□□ -1.33
RTN4Q9NQC3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 UBE3AP2-201ENST00000429033 2259 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RN7SKP128-201ENST00000364270 303 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 Y_RNA.319-201ENST00000365138 92 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RNU6-622P-201ENST00000384272 103 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AL391361.1-201ENST00000405580 489 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RPL21P50-201ENST00000417698 477 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AL591419.1-201ENST00000427423 339 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AL162739.1-201ENST00000450606 307 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RN7SL83P-201ENST00000468131 297 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AP001025.1-201ENST00000486139 332 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AC010469.2-201ENST00000496412 480 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AC009567.2-201ENST00000502989 349 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RNU6-1012P-201ENST00000516606 109 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RNA5SP54-201ENST00000516951 92 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 IGLV3-24-201ENST00000517477 197 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AL589743.6-201ENST00000611025 117 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AC012531.5-201ENST00000611375 151 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 MIR376A1-201ENST00000616574 68 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 SNORA43.4-201ENST00000629559 138 ntBASIC6.76□□□□□ -1.33
RTN4Q9NQC3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.76□□□□□ -1.33
RTN4Q9NQC3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RNU6-1301P-201ENST00000362724 104 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RNU1-49P-201ENST00000363468 159 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 MIR431-201ENST00000385266 114 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RNA5SP36-201ENST00000410197 133 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RNA5SP155-201ENST00000411154 129 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RPS15AP7-201ENST00000439294 405 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms