Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC85AQ96PX6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC85AQ96PX6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 RNY1P16-201ENST00000363063 111 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 MIR135A2-201ENST00000384854 100 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AL030996.1-201ENST00000411430 235 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 RPL21P90-201ENST00000415692 466 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 TMSB10P2-201ENST00000416049 131 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AL132765.1-201ENST00000434165 553 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 FCF1P4-201ENST00000448326 183 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 RPL23AP24-201ENST00000458203 385 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 SNORA31.3-201ENST00000516029 96 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 RNU6-513P-201ENST00000516104 104 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AC087369.1-201ENST00000520775 996 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 MIR3939-201ENST00000582614 106 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 OR1M4P-201ENST00000589199 287 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 ARF4P1-201ENST00000605447 541 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AC096772.1-201ENST00000609146 564 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 AL450472.3-201ENST00000615578 367 ntBASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC85AQ96PX6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.71□□□□□ -1.49
CCDC85AQ96PX6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CCDC85AQ96PX6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RNU6-288P-201ENST00000363690 104 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RNU6-770P-201ENST00000363929 105 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RNU6-1303P-201ENST00000364841 107 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.518-201ENST00000384552 113 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RNU6-33P-201ENST00000384793 107 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL445529.1-201ENST00000398713 389 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 Z98745.1-201ENST00000402553 494 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 MIR548M-201ENST00000408260 86 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 U3.35-201ENST00000408405 208 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 ELOCP20-201ENST00000422460 345 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AC104333.2-201ENST00000422630 192 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AC139712.2-201ENST00000424302 339 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL353997.1-201ENST00000432936 108 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AC090774.1-201ENST00000435925 246 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 CHEK2P4-201ENST00000450340 246 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AC010618.1-201ENST00000469924 477 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 RPS27AP13-201ENST00000498403 237 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL137100.2-201ENST00000555786 315 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 HMGB2P1-201ENST00000591146 634 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AP005019.3-201ENST00000620418 560 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 AL031601.2-202ENST00000622650 282 ntBASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC85AQ96PX6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 RNU6-1093P-201ENST00000391194 107 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 MTCO3P19-201ENST00000415864 321 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 BX842559.1-201ENST00000419615 532 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 EIF4HP2-201ENST00000424380 563 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 RNU6-789P-201ENST00000517105 102 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 RRN3P3-201ENST00000549207 578 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 MIR15A-201ENST00000607334 83 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 AC000123.3-201ENST00000624029 4975 ntBASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC85AQ96PX6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC104623.2-202ENST00000623477 4002 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNU6-200P-201ENST00000364743 107 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNU6-933P-201ENST00000384424 107 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNU2-43P-201ENST00000410306 190 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms