Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPSAP73-201ENST00000614820 330 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 MIR548AY-201ENST00000617669 107 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 CU639417.4-201ENST00000623928 207 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 AL139811.1-201ENST00000424779 2299 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.21□□□□□ -1.42
NUBP1P53384 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NUBP1P53384 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NUBP1P53384 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NUBP1P53384 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.2□□□□□ -1.42
NUBP1P53384 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NUBP1P53384 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 MIR223-201ENST00000385204 110 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 MIR550A3-201ENST00000390735 95 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 AC016739.1-201ENST00000405359 345 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 U6atac.2-201ENST00000408644 118 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 SNORA36B-201ENST00000410438 131 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.2□□□□□ -1.42
NUBP1P53384 snoU13.24-201ENST00000458998 104 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 Y_RNA.690-201ENST00000516603 95 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 AC090897.2-201ENST00000581715 130 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NUBP1P53384 U6.115-201ENST00000636045 103 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.2□□□□□ -1.42
NUBP1P53384 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.2□□□□□ -1.42
NUBP1P53384 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUBP1P53384 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.2□□□□□ -1.42
NUBP1P53384 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.2□□□□□ -1.42
NUBP1P53384 AL034549.2-201ENST00000618285 3373 ntBASIC6.2□□□□□ -1.42
NUBP1P53384 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 OR4F13P-202ENST00000560066 2054 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.19□□□□□ -1.42
NUBP1P53384 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.19□□□□□ -1.42
NUBP1P53384 AC002543.1-201ENST00000299783 1954 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NUBP1P53384 RNU6-335P-201ENST00000364563 113 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 SNORD87-201ENST00000364849 89 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 RNU6-487P-201ENST00000365430 104 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 RNU6-1336P-201ENST00000383886 109 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 RNU6-171P-201ENST00000384354 107 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 NDUFS5P3-201ENST00000450668 321 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 RNU6-197P-201ENST00000516680 100 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 IGKV1D-22-201ENST00000518953 324 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.19□□□□□ -1.42
NUBP1P53384 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.19□□□□□ -1.42
NUBP1P53384 FXNP1-201ENST00000555153 337 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 AC012468.1-201ENST00000604888 430 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 AC120057.5-201ENST00000623840 154 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.19□□□□□ -1.42
NUBP1P53384 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.19□□□□□ -1.42
NUBP1P53384 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NUBP1P53384 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUBP1P53384 AC010168.2-201ENST00000562691 5428 ntBASIC6.19□□□□□ -1.42
NUBP1P53384 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NUBP1P53384 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 AL356489.2-201ENST00000566968 3528 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 RNU6-217P-201ENST00000384164 104 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 CBX3P9-201ENST00000402326 552 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 MYL6P5-201ENST00000412707 459 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 AL354868.1-201ENST00000417077 482 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 RPL12P3-201ENST00000440080 396 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.18□□□□□ -1.42
NUBP1P53384 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC6.18□□□□□ -1.42
NUBP1P53384 RNU6-1282P-201ENST00000516735 96 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 MTND6P33-201ENST00000571794 183 ntBASIC6.18□□□□□ -1.42
NUBP1P53384 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms