Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNGA1P29973 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 AC002545.1-201ENST00000592511 181 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AP000907.4-201ENST00000604143 237 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC013553.2-201ENST00000604244 589 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC034102.8-201ENST00000615146 484 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CNGA1P29973 YWHAEP7-203ENST00000622054 312 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 MTND5P42-201ENST00000637720 498 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNGA1P29973 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.44□□□□□ -1.7
CNGA1P29973 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 MTND5P1-201ENST00000445440 1375 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CNGA1P29973 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 RNU6-190P-201ENST00000384154 102 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 Y_RNA.576-201ENST00000384781 102 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AL138878.1-201ENST00000405131 347 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 U3.42-201ENST00000408746 214 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 YPEL5P1-201ENST00000419731 367 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.43□□□□□ -1.7
CNGA1P29973 GTF2IP20-201ENST00000431663 360 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 CBWD4P-201ENST00000445695 655 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 CYCSP35-201ENST00000451978 304 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.43□□□□□ -1.7
CNGA1P29973 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 AL163973.1-201ENST00000484753 577 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 RN7SL271P-201ENST00000487601 295 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC025554.1-201ENST00000505641 188 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC092436.1-201ENST00000506450 503 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 RN7SKP219-201ENST00000516825 296 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 RNU6-677P-201ENST00000516914 101 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 IGKV2-38-201ENST00000517443 247 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.43□□□□□ -1.7
CNGA1P29973 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC068135.2-201ENST00000569293 1028 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 MIR4703-201ENST00000577728 79 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 MIR3922-201ENST00000585192 84 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC104662.1-201ENST00000604448 511 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC012409.4-201ENST00000612923 249 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AL110115.1-201ENST00000614396 364 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 AC002553.4-201ENST00000616896 331 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.43□□□□□ -1.7
CNGA1P29973 U6.105-201ENST00000637379 88 ntBASIC4.43□□□□□ -1.7
CNGA1P29973 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNGA1P29973 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.43□□□□□ -1.7
CNGA1P29973 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CNGA1P29973 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CNGA1P29973 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
CNGA1P29973 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNGA1P29973 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CNGA1P29973 AC103710.2-202ENST00000641454 2853 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CNGA1P29973 Y_RNA.38-201ENST00000362617 102 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 RNY3P3-201ENST00000363816 102 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 Y_RNA.295-201ENST00000364918 102 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 MIR493-201ENST00000385254 89 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 PTMAP5-201ENST00000393073 333 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 HMGB1P27-201ENST00000431429 603 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.42□□□□□ -1.7
CNGA1P29973 TAAR7P-201ENST00000436141 242 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.42□□□□□ -1.7
CNGA1P29973 HMGB3P22-202ENST00000451823 572 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 AL162395.1-201ENST00000457882 422 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 RNU6-953P-201ENST00000459154 107 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 RPS29P25-201ENST00000481709 171 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 AP001086.1-201ENST00000494882 321 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNGA1P29973 AC022695.1-201ENST00000522089 237 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNGA1P29973 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.42□□□□□ -1.7
CNGA1P29973 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 YPEL5P3-201ENST00000547227 352 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.42□□□□□ -1.7
CNGA1P29973 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 uc_338.11-201ENST00000619132 160 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 U6.114-201ENST00000636407 96 ntBASIC4.42□□□□□ -1.7
CNGA1P29973 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms