Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RAPGEF3O95398 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
RAPGEF3O95398 SCN1A-220ENST00000641603 12506 ntBASIC4.9□□□□□ -1.62
RAPGEF3O95398 RNU6-1249P-201ENST00000363237 111 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 RN7SKP44-201ENST00000363602 316 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 RNU5E-4P-201ENST00000364931 120 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AMD1P2-201ENST00000412936 992 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 RPL7P54-201ENST00000438336 674 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 MTND3P10-201ENST00000450967 341 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 SCARNA24.1-201ENST00000516465 137 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 OR4R1P-201ENST00000529879 463 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC091544.4-201ENST00000555268 342 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC020914.4-201ENST00000597690 277 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AL357078.3-201ENST00000607528 618 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 AC103710.2-201ENST00000609912 942 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RAPGEF3O95398 MIR6130-201ENST00000619419 109 ntBASIC4.9□□□□□ -1.63
RAPGEF3O95398 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.9□□□□□ -1.63
RAPGEF3O95398 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 HSPE1P11-201ENST00000339579 310 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 SNORD56.2-201ENST00000363242 71 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 RNA5SP239-201ENST00000410218 129 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 EEF1A1P41-201ENST00000414667 207 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 MRPL50P2-201ENST00000416821 482 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 ZNF90P2-204ENST00000419323 1075 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 SNRPEP10-201ENST00000420249 274 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 OR4K11P-201ENST00000431829 904 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC016696.1-201ENST00000446949 318 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 DPPA3P1-201ENST00000448050 469 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 HMGN2P7-201ENST00000456186 273 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC093278.1-201ENST00000494700 600 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC068305.1-201ENST00000497406 726 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC135721.1-201ENST00000497954 479 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 RNU6-358P-201ENST00000516564 75 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 RNU6-1220P-201ENST00000517126 108 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 NDUFB9P3-201ENST00000521269 501 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AL121579.1-201ENST00000555129 305 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 H3F3AP1-201ENST00000559984 334 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 GLUD1P4-201ENST00000590914 418 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC025449.1-201ENST00000603896 529 ntBASIC4.89□□□□□ -1.63
RAPGEF3O95398 FER-210ENST00000628534 558 ntTSL 5 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.89□□□□□ -1.63
RAPGEF3O95398 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAPGEF3O95398 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAPGEF3O95398 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 JKAMPP1-201ENST00000413804 919 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL139281.1-201ENST00000422120 335 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL121871.1-201ENST00000443413 436 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 RNU6-261P-201ENST00000459506 102 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 YWHAEP4-201ENST00000505390 198 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 AC008489.1-201ENST00000524271 483 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 Z84480.1-201ENST00000605131 311 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AL020991.1-201ENST00000612314 373 ntBASIC4.88□□□□□ -1.63
RAPGEF3O95398 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.88□□□□□ -1.63
RAPGEF3O95398 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAPGEF3O95398 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAPGEF3O95398 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms