Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 RNU4-82P-201ENST00000362443 140 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 CIR1P3-201ENST00000405137 479 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 RNU2-42P-201ENST00000410697 113 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC018630.2-202ENST00000422992 927 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 PPP1R11P2-201ENST00000423543 382 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 OR10R1P-201ENST00000441524 1141 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 BMI1P1-201ENST00000445879 941 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 SNORA59A-201ENST00000459326 152 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC022447.3-201ENST00000506865 495 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC008837.1-201ENST00000511513 412 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 MTND2P31-201ENST00000512602 616 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AP003122.3-201ENST00000526316 255 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC087897.1-201ENST00000550134 156 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 DNAJC19P3-201ENST00000594491 331 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC099785.1-201ENST00000605697 437 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AL390208.1-201ENST00000605885 644 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC005332.6-201ENST00000613178 446 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 AC107982.1-201ENST00000507171 1300 ntBASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.13□□□□□ -2.07
SDHAF3Q9NRP4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 SNORA67.4-201ENST00000384688 142 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 RPL7P27-201ENST00000403775 720 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 HMGB3P2-201ENST00000411913 584 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 CCDC58P2-201ENST00000417131 366 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 DDX3P2-201ENST00000446138 111 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC072039.1-201ENST00000477611 581 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 RN7SKP31-201ENST00000516354 278 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 RNU6-528P-201ENST00000516926 100 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AP003467.2-201ENST00000520175 319 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC022861.1-201ENST00000522981 663 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AL132857.1-201ENST00000555180 708 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC007229.1-201ENST00000590455 412 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC080013.4-201ENST00000607624 649 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC008759.3-201ENST00000613300 508 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AL590099.1-201ENST00000615276 138 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 MIR6130-201ENST00000619419 109 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 AC008443.7-201ENST00000622195 246 ntBASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
SDHAF3Q9NRP4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC007785.2-201ENST00000598627 1916 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AP005901.5-201ENST00000545779 1796 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 Y_RNA.110-201ENST00000363220 99 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 RNU6-236P-201ENST00000363886 106 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 RNU1-91P-201ENST00000364746 163 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AL161449.1-201ENST00000414531 1199 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AL135786.1-201ENST00000415892 214 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 CYCSP48-201ENST00000417124 323 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AL139421.1-201ENST00000423010 169 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC124916.1-201ENST00000444020 547 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 MTCO3P11-201ENST00000455103 774 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC026801.1-201ENST00000497178 464 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AC025755.1-201ENST00000521306 278 ntBASIC2.11□□□□□ -2.07
SDHAF3Q9NRP4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms