Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CNTNAP3BQ96NU0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 AC239868.2-201ENST00000564237 4527 ntBASIC5.21□□□□□ -1.57
CNTNAP3BQ96NU0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC138907.8-201ENST00000623981 2256 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SNORA25.1-201ENST00000362326 128 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SNORD1C-201ENST00000363315 78 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP30-201ENST00000365552 115 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SNORA5.1-201ENST00000384275 131 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 HSPE1P8-201ENST00000406997 288 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RPL21P90-201ENST00000415692 466 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 TMSB10P2-201ENST00000416049 131 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC099677.1-201ENST00000420575 175 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RPL23AP83-201ENST00000434984 473 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 Z92846.1-201ENST00000456203 268 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-953P-201ENST00000459154 107 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 NIP7P2-201ENST00000485801 544 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC091959.1-201ENST00000495857 238 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SNORA27.4-201ENST00000516650 95 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 MIR5692C2-201ENST00000577959 77 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC009318.2-201ENST00000610917 651 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SNORD39.4-201ENST00000620099 78 ntBASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CNTNAP3BQ96NU0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AL451142.2-201ENST00000429076 2090 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 SNURFL-201ENST00000309296 343 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.23-201ENST00000362496 106 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-989P-201ENST00000362756 107 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.262-201ENST00000364641 102 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.571-201ENST00000384753 98 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 SNORA12.2-201ENST00000391040 156 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AL078599.1-201ENST00000402075 293 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AL022722.2-201ENST00000402519 180 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 MIR1302-4-201ENST00000408701 150 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 RPS27AP12-201ENST00000429552 465 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 RN7SL189P-201ENST00000468631 289 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 MTND3P25-201ENST00000509243 135 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CASP1P1-201ENST00000526345 212 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 LRRC37A5P-203ENST00000580181 585 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 AC090607.5-201ENST00000615692 224 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 FAM91A3P-201ENST00000456826 2544 ntBASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNTNAP3BQ96NU0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RAD17P1-201ENST00000418130 2042 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms