Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 HMGB1P41-201ENST00000520234 440 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 IGKV2D-19-201ENST00000523346 262 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT40Q6A162 SETP7-201ENST00000552169 453 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 PSMA3P-201ENST00000555485 635 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR5195-201ENST00000583555 115 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR4293-201ENST00000584305 78 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT40Q6A162 AL133255.1-201ENST00000606374 441 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR1302-2-201ENST00000607096 138 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC004908.2-201ENST00000609090 574 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT40Q6A162 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT40Q6A162 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT40Q6A162 AL133216.2-202ENST00000634512 349 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 AL645937.1-201ENST00000641739 1652 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
KRT40Q6A162 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT40Q6A162 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 AC018529.3-201ENST00000624212 2254 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT40Q6A162 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT40Q6A162 RNU6-38P-201ENST00000384085 107 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 RNU6-831P-201ENST00000384548 107 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 RNU6-510P-201ENST00000391239 108 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT40Q6A162 UBE2V1P2-201ENST00000397758 440 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 HSPE1P8-201ENST00000406997 288 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 RPL21P109-201ENST00000422213 475 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 HMGB1P18-201ENST00000438801 619 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT40Q6A162 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT40Q6A162 RNU7-59P-201ENST00000459101 61 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 RNU6-333P-201ENST00000459117 107 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 RN7SL93P-201ENST00000463035 293 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 HMGB1P25-201ENST00000468402 607 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT40Q6A162 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 AP003072.1-201ENST00000531740 145 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 OR5B10P-201ENST00000532869 642 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT40Q6A162 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT40Q6A162 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT40Q6A162 MIR4424-201ENST00000585257 86 ntBASIC4.36□□□□□ -1.71
KRT40Q6A162 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT40Q6A162 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT40Q6A162 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT40Q6A162 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
KRT40Q6A162 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KRT40Q6A162 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT40Q6A162 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT40Q6A162 RNU1-18P-201ENST00000363062 164 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 TXNP7-201ENST00000406296 293 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 RNU2-47P-201ENST00000410649 186 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 RPS29P4-201ENST00000414733 161 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC005534.2-201ENST00000431047 433 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC016696.1-201ENST00000446949 318 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AL590639.1-201ENST00000456484 337 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC116562.3-201ENST00000506136 177 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT40Q6A162 SNORA19.2-201ENST00000516013 114 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 RNU6-64P-201ENST00000517119 105 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AP005597.4-201ENST00000526762 229 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC011979.2-201ENST00000527568 352 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC068587.5-201ENST00000528506 175 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 BNIP3P6-201ENST00000549284 499 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AL118558.2-201ENST00000556294 238 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC026464.5-201ENST00000562497 722 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 MIR3124-201ENST00000582636 67 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 AC007687.1-201ENST00000602704 304 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT40Q6A162 AC006329.2-201ENST00000611491 394 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 PART1_1.1-201ENST00000611761 217 ntBASIC4.35□□□□□ -1.71
KRT40Q6A162 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT40Q6A162 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms