Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 VN1R87P-201ENST00000596706 487 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AC008121.1-201ENST00000603244 268 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AP000403.1-201ENST00000603349 851 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AC021749.1-201ENST00000604322 607 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AL589743.7-201ENST00000612637 233 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AC025594.3-201ENST00000613068 790 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AC013476.2-201ENST00000614456 459 ntBASIC1.9□□□□□ -2.11
ATF1P18846 AC093591.3-201ENST00000634516 308 ntBASIC1.9□□□□□ -2.11
ATF1P18846 MIR203B-201ENST00000636080 86 ntBASIC1.9□□□□□ -2.11
ATF1P18846 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.9□□□□□ -2.11
ATF1P18846 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ATF1P18846 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
ATF1P18846 AC004520.1-201ENST00000608362 1413 ntBASIC1.9□□□□□ -2.11
ATF1P18846 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
ATF1P18846 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.89□□□□□ -2.11
ATF1P18846 U3.12-201ENST00000364498 214 ntBASIC1.89□□□□□ -2.11
ATF1P18846 SNORA23-201ENST00000365128 182 ntBASIC1.89□□□□□ -2.11
ATF1P18846 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
ATF1P18846 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
ATF1P18846 TPMTP2-201ENST00000414372 726 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC005005.2-201ENST00000420779 380 ntBASIC1.89□□□□□ -2.11
ATF1P18846 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.89□□□□□ -2.11
ATF1P18846 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.89□□□□□ -2.11
ATF1P18846 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.89□□□□□ -2.11
ATF1P18846 AC097493.1-201ENST00000463958 372 ntBASIC1.89□□□□□ -2.11
ATF1P18846 RPS20P22-201ENST00000473700 357 ntBASIC1.89□□□□□ -2.11
ATF1P18846 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ATF1P18846 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 AC008427.1-201ENST00000503102 655 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC114981.1-201ENST00000503897 678 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC093801.2-201ENST00000503966 1050 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.89□□□□□ -2.11
ATF1P18846 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.89□□□□□ -2.11
ATF1P18846 RNU6-714P-201ENST00000516963 103 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.89□□□□□ -2.11
ATF1P18846 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 AC025755.1-201ENST00000521306 278 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AP001646.1-201ENST00000527936 915 ntBASIC1.89□□□□□ -2.11
ATF1P18846 SLC2A13P1-201ENST00000531560 322 ntBASIC1.89□□□□□ -2.11
ATF1P18846 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.89□□□□□ -2.11
ATF1P18846 HIGD1AP17-201ENST00000554576 276 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AL359212.1-201ENST00000556608 614 ntBASIC1.89□□□□□ -2.11
ATF1P18846 MIR3199-1-201ENST00000582434 88 ntBASIC1.89□□□□□ -2.11
ATF1P18846 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 AC069304.2-201ENST00000605154 435 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC026790.2-201ENST00000606282 430 ntBASIC1.89□□□□□ -2.11
ATF1P18846 AC025034.2-201ENST00000623264 286 ntBASIC1.89□□□□□ -2.11
ATF1P18846 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ATF1P18846 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.89□□□□□ -2.11
ATF1P18846 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATF1P18846 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 AC010329.5-201ENST00000623497 2174 ntBASIC1.88□□□□□ -2.11
ATF1P18846 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.88□□□□□ -2.11
ATF1P18846 Y_RNA.408-201ENST00000383987 102 ntBASIC1.88□□□□□ -2.11
ATF1P18846 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ATF1P18846 SNORA48.3-201ENST00000391081 134 ntBASIC1.88□□□□□ -2.11
ATF1P18846 MIR888-201ENST00000401186 77 ntBASIC1.88□□□□□ -2.11
ATF1P18846 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
ATF1P18846 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 ARF4P4-201ENST00000439608 520 ntBASIC1.88□□□□□ -2.11
ATF1P18846 OSTCP8-201ENST00000445117 448 ntBASIC1.88□□□□□ -2.11
ATF1P18846 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.88□□□□□ -2.11
ATF1P18846 BX322784.1-201ENST00000455793 1077 ntBASIC1.88□□□□□ -2.11
ATF1P18846 HMGB1P28-201ENST00000507778 552 ntBASIC1.88□□□□□ -2.11
ATF1P18846 RNA5SP200-201ENST00000516360 103 ntBASIC1.88□□□□□ -2.11
ATF1P18846 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
ATF1P18846 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
ATF1P18846 RNA5SP291-201ENST00000517222 105 ntBASIC1.88□□□□□ -2.11
ATF1P18846 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 AC104417.1-201ENST00000523974 751 ntBASIC1.88□□□□□ -2.11
ATF1P18846 AC118942.1-201ENST00000529674 1035 ntBASIC1.88□□□□□ -2.11
ATF1P18846 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 RPS3AP23-202ENST00000574601 686 ntBASIC1.88□□□□□ -2.11
ATF1P18846 MIR5571-201ENST00000577998 113 ntBASIC1.88□□□□□ -2.11
ATF1P18846 SNORD53-201ENST00000579969 78 ntBASIC1.88□□□□□ -2.11
ATF1P18846 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 AC025588.2-201ENST00000604851 466 ntBASIC1.88□□□□□ -2.11
ATF1P18846 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
ATF1P18846 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.88□□□□□ -2.11
ATF1P18846 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
ATF1P18846 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
ATF1P18846 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATF1P18846 AL138713.1-201ENST00000624026 2130 ntBASIC1.87□□□□□ -2.11
ATF1P18846 FAM133CP-201ENST00000332869 704 ntBASIC1.87□□□□□ -2.11
ATF1P18846 OR56A5-201ENST00000340110 738 ntBASIC1.87□□□□□ -2.11
ATF1P18846 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATF1P18846 RNU5B-4P-201ENST00000363508 111 ntBASIC1.87□□□□□ -2.11
ATF1P18846 RNU6-1078P-201ENST00000364522 103 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms