Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RNA5SP468-201ENST00000516782 93 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC135628.1-201ENST00000568867 534 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC011260.1-201ENST00000578420 472 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 MIR544B-201ENST00000582372 78 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 UBE2L4-201ENST00000587688 464 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC013444.2-201ENST00000603317 787 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AL158801.5-201ENST00000623123 465 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 AC019226.2-201ENST00000625973 424 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 CTSLP2-204ENST00000629029 392 ntBASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RNF41Q9H4P4 RNU6-769P-201ENST00000384407 104 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL356421.1-201ENST00000403255 413 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL162578.1-201ENST00000406202 378 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 MIR1305-201ENST00000408300 86 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 RPS15AP38-201ENST00000413110 372 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC109780.2-201ENST00000413467 845 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 FCF1P1-201ENST00000432690 571 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 UBE2FP3-201ENST00000436366 524 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 RAC1P7-201ENST00000445367 377 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL513328.1-201ENST00000446460 224 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC021382.1-201ENST00000483523 359 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 RNU1-61P-201ENST00000516107 151 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC008015.1-201ENST00000555505 465 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 MED28P6-201ENST00000558776 231 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 TUG1_1.1-201ENST00000610654 145 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC243829.7-201ENST00000633081 225 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 PCMTD1P7-201ENST00000634506 357 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AC099063.3-201ENST00000642066 185 ntBASIC2.91□□□□□ -1.94
RNF41Q9H4P4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF41Q9H4P4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RNF41Q9H4P4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AL591034.1-201ENST00000407447 340 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 MTCO1P17-201ENST00000411522 491 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 RPL17P49-201ENST00000443728 411 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 RPL23AP20-201ENST00000447965 421 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 ART2BP-201ENST00000453501 499 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 SNORA59A-201ENST00000459326 152 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 RPS3AP22-201ENST00000488297 769 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC022447.3-201ENST00000506865 495 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 HMGB1P41-201ENST00000520234 440 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AP001646.1-201ENST00000527936 915 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC145350.1-201ENST00000567426 208 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AP001330.4-201ENST00000604350 154 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC012443.1-201ENST00000605605 231 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AL110115.1-201ENST00000614396 364 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AL450472.3-201ENST00000615578 367 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 AC079416.3-201ENST00000624479 549 ntBASIC2.9□□□□□ -1.95
RNF41Q9H4P4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF41Q9H4P4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms