Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-40P-201ENST00000384254 107 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 HMGN2P39-201ENST00000398005 273 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 HMGB1P17-201ENST00000403495 628 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 RNU2-43P-201ENST00000410306 190 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 RNU2-47P-201ENST00000410649 186 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AL158823.1-201ENST00000418441 478 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 RPL30P4-201ENST00000429309 333 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AL512637.2-201ENST00000431287 1256 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 PIGFP3-201ENST00000441918 722 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 RPL21P99-201ENST00000480369 423 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 SLC25A15P5-201ENST00000508033 253 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 ZNF705CP-201ENST00000530515 889 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 LINC00933-203ENST00000559812 219 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC243960.4-201ENST00000600532 288 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AL022067.1-201ENST00000602426 454 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 AC068276.1-201ENST00000605793 379 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 MIR6130-201ENST00000619419 109 ntBASIC1.35□□□□□ -2.19
AP1S3Q96PC3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
AP1S3Q96PC3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 MIR7-1-201ENST00000384871 110 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC068050.1-201ENST00000394891 380 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 RN7SKP32-201ENST00000410167 303 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AL357078.2-201ENST00000416486 427 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AL590383.1-201ENST00000428602 75 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC006946.1-201ENST00000429106 328 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 RPL23AP16-201ENST00000441715 421 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AP1S2P1-201ENST00000457344 379 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 HMGB1P36-201ENST00000487709 576 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 MTAPP1-201ENST00000489154 819 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC034222.1-201ENST00000494052 532 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AF213884.2-201ENST00000510417 903 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AP002770.2-201ENST00000543613 532 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 MIR4285-201ENST00000581001 85 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 NRBF2P1-201ENST00000587407 859 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 UBE2L4-201ENST00000587688 464 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AP000403.1-201ENST00000603349 851 ntBASIC1.34□□□□□ -2.19
AP1S3Q96PC3 AL356473.1-201ENST00000406203 1408 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 SEC63P2-201ENST00000503863 1939 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 RNU6-252P-201ENST00000363232 107 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC019129.1-201ENST00000403786 261 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AL133384.1-201ENST00000412744 351 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC244636.1-201ENST00000421152 228 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AL353729.1-201ENST00000425044 720 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC096638.1-201ENST00000444678 216 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC008526.1-201ENST00000509149 338 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 SCARNA15.2-201ENST00000516409 127 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AP001269.3-201ENST00000588718 329 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 VN1R88P-201ENST00000596787 292 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 RPP40P2-201ENST00000603596 712 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC007038.2-201ENST00000608095 740 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC069294.1-201ENST00000608397 350 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 FRG1HP-204ENST00000617940 757 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC109454.4-201ENST00000623411 649 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 MKKS-204ENST00000639674 192 ntBASIC1.33□□□□□ -2.2
AP1S3Q96PC3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
AP1S3Q96PC3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 SNORA64-201ENST00000384674 134 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AL023284.1-201ENST00000403956 276 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 VN1R51P-201ENST00000411675 945 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC096649.2-201ENST00000416186 393 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms