Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TPTE2P5-203ENST00000458118 728 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 RN7SL432P-201ENST00000484057 298 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 FABP5P5-201ENST00000515537 406 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 Y_RNA.695-201ENST00000516715 107 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC034268.2-201ENST00000571784 482 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 UBE2L4-201ENST00000587688 464 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC119751.7-201ENST00000600494 245 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC064872.1-201ENST00000604823 1072 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC239868.4-201ENST00000608318 671 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC027807.2-201ENST00000616099 408 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC009509.4-201ENST00000619202 509 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AL158801.5-201ENST00000623123 465 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC025048.6-202ENST00000627667 438 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC093591.3-201ENST00000634516 308 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC010149.2-201ENST00000637608 315 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 MTND5P33-201ENST00000571250 1450 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 FRG1BP-201ENST00000278882 761 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 DEFB108F-201ENST00000344638 222 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC062016.1-201ENST00000355719 319 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 RNY4P24-201ENST00000362735 96 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 RNU4-24P-201ENST00000364565 139 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 Y_RNA.553-201ENST00000384670 102 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 SNORD115.1-201ENST00000391109 76 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AL139095.1-201ENST00000404326 391 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 U3.42-201ENST00000408746 214 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 RNU2-43P-201ENST00000410306 190 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 RPL17P12-201ENST00000413391 526 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 CCDC58P2-201ENST00000417131 366 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 ST13P20-201ENST00000447996 1065 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 SNRPGP9-201ENST00000456025 225 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC021382.1-201ENST00000483523 359 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 CBX3P3-201ENST00000508108 532 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC091965.2-201ENST00000512324 613 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC010265.1-201ENST00000513509 211 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 DEFB108D-201ENST00000527787 222 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC024909.2-201ENST00000553035 286 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 MIR3921-201ENST00000577308 85 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC138761.3-201ENST00000579993 334 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC004223.2-201ENST00000590309 544 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 NRBF2P5-201ENST00000603087 788 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 U73023.1-201ENST00000603134 700 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC068276.1-201ENST00000605793 379 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC138749.5-201ENST00000611461 208 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC011939.3-201ENST00000613686 466 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC116165.2-201ENST00000616705 206 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 IGHVIII-44-202ENST00000636235 289 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN4Q96NY8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 RNU4-82P-201ENST00000362443 140 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 RNU6-853P-201ENST00000364306 107 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 RNU5E-5P-201ENST00000365379 116 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
NECTIN4Q96NY8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms